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通过量子力学计算手性光谱确定绝对构型:基础及在真菌代谢产物中的应用

Absolute Configuration Determination by Quantum Mechanical Calculation of Chiroptical Spectra: Basics and Applications to Fungal Metabolites.

作者信息

Superchi Stefano, Scafato Patrizia, Gorecki Marcin, Pescitelli Gennaro

机构信息

Dipartimento di Scienze, Universita della Basilicata, Potenza, Italy.

Dipartimento di Chimica e Chimica Industriale, Universita di Pisa, Pisa, Italy.

出版信息

Curr Med Chem. 2018;25(2):287-320. doi: 10.2174/0929867324666170310112009.

Abstract

BACKGROUND

Quantum mechanical simulations of chiroptical properties, such as electronic circular dichroism (ECD), optical rotation (OR), and vibrational circular dichroism (VCD), have rapidly become very popular to assign the absolute configuration of novel natural products.

OBJECTIVE

We review the application of the ECD/OR/VCD computational methodology to chiral metabolites of fungal origin. First, we summarize the fundamentals of the three spectroscopies; then, we focus on the specific experimental and computational issues allied to the application of their calculations.

METHODS

We surveyed the entire literature describing the use of ECD/OR/VCD computations for fungal metabolites, and catalogued all papers according to the method employed and to the structural family of compounds. Then, we chose several examples to illustrate the use of the techniques and highlight the practical application of the computational approach.

RESULTS

Our literature survey demonstrates that the simulation of ECD/OR/VCD spectra is nowadays widespread and accessible also to non-experts, although a good computational practice is necessary to avoid wrong assignments. ECD is still the most common technique used in the context of fungal metabolites. OR and VCD may be profitably employed when the compound of interest lacks chromophoric groups. Our examples illustrate that the combination of two or more chiroptical methods is strongly advisable in some cases, especially in the presence of high conformational flexibility, where a single technique does not lead to a safe conclusion.

CONCLUSION

The ECD/OR/VCD computational approach is a reliable and versatile method to assign the absolute configuration of fungal metabolites and related natural products.

摘要

背景

对诸如电子圆二色性(ECD)、旋光性(OR)和振动圆二色性(VCD)等手性光学性质进行量子力学模拟,已迅速在确定新型天然产物的绝对构型方面变得非常流行。

目的

我们综述ECD/OR/VCD计算方法在真菌来源的手性代谢产物中的应用。首先,我们总结这三种光谱学的基本原理;然后,我们重点关注与其计算应用相关的具体实验和计算问题。

方法

我们查阅了描述ECD/OR/VCD计算用于真菌代谢产物的全部文献,并根据所采用的方法和化合物的结构家族对所有论文进行了编目。然后,我们选择了几个例子来说明这些技术的应用,并突出计算方法的实际应用。

结果

我们的文献调查表明,如今ECD/OR/VCD光谱模拟已广泛应用,非专家也可使用,不过需要良好的计算实践以避免错误归属。ECD仍是真菌代谢产物研究中最常用的技术。当目标化合物缺乏发色团时,OR和VCD可能会有很好的应用效果。我们的例子表明,在某些情况下,强烈建议结合使用两种或更多种手性光学方法,特别是在存在高构象灵活性的情况下,此时单一技术无法得出可靠结论。

结论

ECD/OR/VCD计算方法是确定真菌代谢产物及相关天然产物绝对构型的可靠且通用的方法。

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