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对半合成核糖核酸酶S'和核糖核酸酶A中活性位点氨基酸的15N和1H核磁共振研究。

15N- and 1H-NMR investigations of the active-site amino acids in semisynthetic RNase S' and RNase A.

作者信息

Knoblauch H, Rüterjans H, Bloemhoff W, Kerling K E

机构信息

Institut für Biophysikalische Chemie, J.W. Goethe-Universität, Frankfurt, Federal Republic of Germany.

出版信息

Eur J Biochem. 1988 Mar 1;172(2):485-97. doi: 10.1111/j.1432-1033.1988.tb13914.x.

Abstract

Extensive 15N-NMR investigations of active-site amino acids were made possible by the solid-phase synthesis of the N-terminal pentadecapeptide of RNase A with selectively 15N-enriched amino acids. On complexation with S-protein a fully active RNase S' complex was obtained. The 15N resonances of the side chains of lysine-7 (N epsilon), glutamine-11 (N gamma), and histidine-12 (N pi, tau) were studied in the free synthetic peptide, in the RNase S' complex and in the nucleotide complexes RNase S' with 2'CMP, 3'CMP, and 5'AMP. The analysis of the 15N-1H couplings, the 15N line broadenings due to proton exchange, and the chemical shift values showed that, while the imidazole ring is directly involved in the peptide-protein interaction, the side chains of Lys-7 and Gln-11 do not contribute to this interaction. In the nucleotide complexes the resonances of His-12 and Gln-11 are shifted downfield. In the 2'CMP complex a doublet for the N tau signal of His-12 indicates a stable H bond between this nitrogen and the phosphate group of nucleotide. The other nucleotide influence the resonances of the imidazole group much less, possibly due to a slightly different orientation of the phosphate group. The downfield shift of the Gln-11 resonance indicates an interaction between the carbonyl oxygen of the amide group and the phosphate moiety of the nucleotide. The only observable effect of nucleotide complexation on the Lys-7 signal is line broadening due to reduced proton exchange. For comparison with the 15N-NMR titration curves of His-12 in RNase S' the 1H-NMR titration curves of RNase A were also recorded. Both shape and pK values were very similar for the 15N and the 1H titration curves. An extensive analysis of the protonation equilibria with several fitting models showed that a mutual interaction of the imidazole groups of the active-site histidines results in flat titration curves. The Hill plots of all resonances of the imidazole rings, including the 15N resonances, show a small inflection in the pH range 5.8-6.4. Since the existence of a diimidazole system is most likely in this pH range, the inflection could be interpreted as a disturbance of the mutual electrostatic interaction of the active-site histidines by a partial H-bond formation between the imidazole groups.

摘要

通过用选择性富含(^{15}N)的氨基酸固相合成核糖核酸酶A的N端十五肽,使得对活性位点氨基酸进行广泛的(^{15}N)-核磁共振研究成为可能。与S蛋白络合后,获得了完全活性的核糖核酸酶S'复合物。在游离合成肽、核糖核酸酶S'复合物以及与2'CMP、3'CMP和5'AMP形成的核苷酸复合物核糖核酸酶S'中,研究了赖氨酸-7((N\epsilon))、谷氨酰胺-11((N\gamma))和组氨酸-12((N\pi),(\tau))侧链的(^{15}N)共振。对(^{15}N - ^{1}H)耦合、由于质子交换导致的(^{15}N)谱线展宽以及化学位移值的分析表明,虽然咪唑环直接参与肽 - 蛋白质相互作用,但赖氨酸-7和谷氨酰胺-11的侧链对这种相互作用没有贡献。在核苷酸复合物中,组氨酸-12和谷氨酰胺-11的共振向低场移动。在2'CMP复合物中,组氨酸-12的(N\tau)信号的双峰表明该氮与核苷酸的磷酸基团之间存在稳定的氢键。其他核苷酸对咪唑基团共振的影响要小得多,可能是由于磷酸基团的取向略有不同。谷氨酰胺-11共振的低场移动表明酰胺基团的羰基氧与核苷酸的磷酸部分之间存在相互作用。核苷酸络合对赖氨酸-7信号唯一可观察到的影响是由于质子交换减少导致谱线展宽。为了与核糖核酸酶S'中组氨酸-12的(^{15}N)-核磁共振滴定曲线进行比较,还记录了核糖核酸酶A的(^{1}H)-核磁共振滴定曲线。(^{15}N)和(^{1}H)滴定曲线的形状和(pK)值非常相似。用几种拟合模型对质子化平衡进行的广泛分析表明,活性位点组氨酸的咪唑基团之间的相互作用导致了平坦的滴定曲线。咪唑环所有共振的希尔图,包括(^{15}N)共振,在(pH)范围5.8 - 6.4内显示出一个小的拐点。由于在这个(pH)范围内很可能存在双咪唑体系,这个拐点可以解释为咪唑基团之间部分氢键形成对活性位点组氨酸相互静电作用的干扰。

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