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Simultaneous sensing and imaging of individual biomolecular complexes enabled by modular DNA-protein coupling.通过模块化DNA-蛋白质偶联实现单个生物分子复合物的同时传感与成像。
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本文引用的文献

1
Small heat shock proteins sequester misfolding proteins in near-native conformation for cellular protection and efficient refolding.小分子热休克蛋白将错误折叠的蛋白质以近乎天然的构象隔离,以实现细胞保护和有效的重折叠。
Nat Commun. 2016 Nov 30;7:13673. doi: 10.1038/ncomms13673.
2
Alternative modes of client binding enable functional plasticity of Hsp70.替代的客户绑定模式使 Hsp70 具有功能可塑性。
Nature. 2016 Nov 17;539(7629):448-451. doi: 10.1038/nature20137. Epub 2016 Oct 26.
3
Structural basis for the antifolding activity of a molecular chaperone.分子伴侣抗折叠活性的结构基础。
Nature. 2016 Sep 8;537(7619):202-206. doi: 10.1038/nature18965. Epub 2016 Aug 8.
4
Cooperation of local motions in the Hsp90 molecular chaperone ATPase mechanism.热休克蛋白90(Hsp90)分子伴侣ATP酶机制中局部运动的协同作用。
Nat Chem Biol. 2016 Aug;12(8):628-35. doi: 10.1038/nchembio.2111. Epub 2016 Jun 20.
5
Dynamic Behavior of Trigger Factor on the Ribosome.触发因子在核糖体上的动态行为
J Mol Biol. 2016 Sep 11;428(18):3588-602. doi: 10.1016/j.jmb.2016.06.007. Epub 2016 Jun 16.
6
Monitoring conformational heterogeneity of the lid of DnaK substrate-binding domain during its chaperone cycle.监测DnaK底物结合结构域盖子在其伴侣循环过程中的构象异质性。
FEBS J. 2016 Aug;283(15):2853-68. doi: 10.1111/febs.13769. Epub 2016 Jul 4.
7
Folding and assembly of the large molecular machine Hsp90 studied in single-molecule experiments.在单分子实验中研究的大分子机器Hsp90的折叠与组装。
Proc Natl Acad Sci U S A. 2016 Feb 2;113(5):1232-7. doi: 10.1073/pnas.1518827113. Epub 2016 Jan 19.
8
The Trigger Factor Chaperone Encapsulates and Stabilizes Partial Folds of Substrate Proteins.触发因子伴侣蛋白包裹并稳定底物蛋白的部分折叠结构。
PLoS Comput Biol. 2015 Oct 29;11(10):e1004444. doi: 10.1371/journal.pcbi.1004444. eCollection 2015 Oct.
9
The GroEL-GroES Chaperonin Machine: A Nano-Cage for Protein Folding.GroEL-GroES 伴护蛋白机器:蛋白质折叠的纳米笼。
Trends Biochem Sci. 2016 Jan;41(1):62-76. doi: 10.1016/j.tibs.2015.07.009. Epub 2015 Sep 25.
10
Single-molecule spectroscopy reveals chaperone-mediated expansion of substrate protein.单分子光谱揭示了伴侣蛋白介导的底物蛋白的扩张。
Proc Natl Acad Sci U S A. 2014 Sep 16;111(37):13355-60. doi: 10.1073/pnas.1407086111. Epub 2014 Aug 27.

单分子水平的伴侣工具箱:从钳制到限制

The chaperone toolbox at the single-molecule level: From clamping to confining.

作者信息

Avellaneda Mario J, Koers Eline J, Naqvi Mohsin M, Tans Sander J

机构信息

AMOLF institute, Science Park 104, 1098XG Amsterdam, The Netherlands.

出版信息

Protein Sci. 2017 Jul;26(7):1291-1302. doi: 10.1002/pro.3161. Epub 2017 Apr 20.

DOI:10.1002/pro.3161
PMID:28342267
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5477537/
Abstract

Protein folding is well known to be supervised by a dedicated class of proteins called chaperones. However, the core mode of action of these molecular machines has remained elusive due to several reasons including the promiscuous nature of the interactions between chaperones and their many clients, as well as the dynamics and heterogeneity of chaperone conformations and the folding process itself. While troublesome for traditional bulk techniques, these properties make an excellent case for the use of single-molecule approaches. In this review, we will discuss how force spectroscopy, fluorescence microscopy, FCS, and FRET methods are starting to zoom in on this intriguing and diverse molecular toolbox that is of direct importance for protein quality control in cells, as well as numerous degenerative conditions that depend on it.

摘要

众所周知,蛋白质折叠由一类名为伴侣蛋白的特殊蛋白质进行监督。然而,由于多种原因,这些分子机器的核心作用模式一直难以捉摸,这些原因包括伴侣蛋白与其众多底物之间相互作用的混杂性质,以及伴侣蛋白构象和折叠过程本身的动态性和异质性。虽然这些特性给传统的整体技术带来了麻烦,但却为单分子方法的应用提供了绝佳案例。在这篇综述中,我们将讨论力谱、荧光显微镜、荧光相关光谱和荧光共振能量转移方法如何开始聚焦于这个有趣且多样的分子工具箱,它对于细胞中的蛋白质质量控制以及许多依赖于它的退行性疾病具有直接重要性。