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核苷化合物及多种次级代谢产物产生菌灰产色链霉菌ATCC 14511的全基因组序列

Complete genome sequence of Streptomyces griseochromogenes ATCC 14511, a producer of nucleoside compounds and diverse secondary metabolites.

作者信息

Wu Lijuan, Chen Guoqing, Feng Guozhong

机构信息

State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, China.

State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou, China.

出版信息

J Biotechnol. 2017 May 10;249:16-19. doi: 10.1016/j.jbiotec.2017.03.017. Epub 2017 Mar 22.

Abstract

ATCC 14511 (=DSM 40499, =NBRC 13413) is a type strain of Streptomyces griseochromogenes. It is known as a producer of nucleoside antibiotic, blasticidin S. In this report we present the complete genome sequence of S. griseochromogenes ATCC 14511, which consists of 10,764,674bp with a linear chromosome, 9822 protein-coding genes, 6 rRNA operons, 74 tRNA and 3 sRNA. The genomic analysis revealed that 52 putative gene clusters are involved in the biosynthesis of secondary metabolites, including four gene clusters of nucleoside antibiotics. These gene clusters provide a beneficial source for production of bioactive natural compounds.

摘要

美国典型培养物保藏中心14511(=德国微生物和细胞培养物保藏中心40499,=日本技术评价研究所13413)是灰产色链霉菌的模式菌株。它是核苷类抗生素杀稻瘟菌素S的产生菌。在本报告中,我们展示了灰产色链霉菌ATCC 14511的完整基因组序列,其由一条线性染色体组成,长度为10,764,674bp,有9822个蛋白质编码基因、6个rRNA操纵子、74个tRNA和3个sRNA。基因组分析表明,52个假定的基因簇参与次级代谢产物的生物合成,其中包括四个核苷类抗生素基因簇。这些基因簇为生物活性天然化合物的生产提供了有益来源。

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