文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

HIV 包膜糖蛋白的全局位点特异性 N-糖基化分析。

Global site-specific N-glycosylation analysis of HIV envelope glycoprotein.

机构信息

Department of Cell and Molecular Biology, The Scripps Research Institute, La Jolla, California 92037, USA.

Department of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037, USA.

出版信息

Nat Commun. 2017 Mar 28;8:14954. doi: 10.1038/ncomms14954.


DOI:10.1038/ncomms14954
PMID:28348411
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5379070/
Abstract

HIV-1 envelope glycoprotein (Env) is the sole target for broadly neutralizing antibodies (bnAbs) and the focus for design of an antibody-based HIV vaccine. The Env trimer is covered by ∼90N-linked glycans, which shield the underlying protein from immune surveillance. bNAbs to HIV develop during infection, with many showing dependence on glycans for binding to Env. The ability to routinely assess the glycan type at each glycosylation site may facilitate design of improved vaccine candidates. Here we present a general mass spectrometry-based proteomics strategy that uses specific endoglycosidases to introduce mass signatures that distinguish peptide glycosites that are unoccupied or occupied by high-mannose/hybrid or complex-type glycans. The method yields >95% sequence coverage for Env, provides semi-quantitative analysis of the glycosylation status at each glycosite. We find that most glycosites in recombinant Env trimers are fully occupied by glycans, varying in the proportion of high-mannose/hybrid and complex-type glycans.

摘要

HIV-1 包膜糖蛋白(Env)是广泛中和抗体(bnAbs)的唯一靶标,也是基于抗体的 HIV 疫苗设计的重点。Env 三聚体被约 90 个 N-连接聚糖覆盖,这些聚糖使潜在的蛋白质免受免疫监视。在感染过程中会产生针对 HIV 的 bnAbs,其中许多 bnAbs 的结合依赖于聚糖与 Env 的结合。常规评估每个糖基化位点的聚糖类型的能力可能有助于设计改进的候选疫苗。在这里,我们提出了一种基于质谱的通用蛋白质组学策略,该策略使用特定的内切糖苷酶引入质量标记,以区分未被高甘露糖/杂合或复杂型聚糖占据或被其占据的肽糖基化位点。该方法对 Env 的覆盖率超过 95%,可对半定量分析每个糖基化位点的糖基化状态。我们发现重组 Env 三聚体中的大多数糖基化位点都被聚糖完全占据,其中高甘露糖/杂合和复杂型聚糖的比例有所不同。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/91808950ac02/ncomms14954-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/e5597404e4aa/ncomms14954-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/d6dc035d7fc3/ncomms14954-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/3fc4ff059bbd/ncomms14954-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/000cbee6bb92/ncomms14954-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/91808950ac02/ncomms14954-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/e5597404e4aa/ncomms14954-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/d6dc035d7fc3/ncomms14954-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/3fc4ff059bbd/ncomms14954-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/000cbee6bb92/ncomms14954-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d28c/5379070/91808950ac02/ncomms14954-f5.jpg

相似文献

[1]
Global site-specific N-glycosylation analysis of HIV envelope glycoprotein.

Nat Commun. 2017-3-28

[2]
Comparative Analysis of the Glycosylation Profiles of Membrane-Anchored HIV-1 Envelope Glycoprotein Trimers and Soluble gp140.

J Virol. 2015-8

[3]
Glycosylation of the core of the HIV-1 envelope subunit protein gp120 is not required for native trimer formation or viral infectivity.

J Biol Chem. 2017-6-16

[4]
Cell- and Protein-Directed Glycosylation of Native Cleaved HIV-1 Envelope.

J Virol. 2015-9

[5]
HIV-1 Glycan Density Drives the Persistence of the Mannose Patch within an Infected Individual.

J Virol. 2016-11-28

[6]
Changes in Structure and Antigenicity of HIV-1 Env Trimers Resulting from Removal of a Conserved CD4 Binding Site-Proximal Glycan.

J Virol. 2016-9-29

[7]
Structural Constraints Determine the Glycosylation of HIV-1 Envelope Trimers.

Cell Rep. 2015-6-16

[8]
Differential processing of HIV envelope glycans on the virus and soluble recombinant trimer.

Nat Commun. 2018-9-12

[9]
Conserved Role of an N-Linked Glycan on the Surface Antigen of Human Immunodeficiency Virus Type 1 Modulating Virus Sensitivity to Broadly Neutralizing Antibodies against the Receptor and Coreceptor Binding Sites.

J Virol. 2015-10-28

[10]
Glycan Profiles of gp120 Protein Vaccines from Four Major HIV-1 Subtypes Produced from Different Host Cell Lines under Non-GMP or GMP Conditions.

J Virol. 2020-3-17

引用本文的文献

[1]
Glycomics in Human Diseases and Its Emerging Role in Biomarker Discovery.

Biomedicines. 2025-8-21

[2]
Plant Lectin, MoMo30, Pressures HIV-1 to Select for Variants with Deleted N-Linked Glycosylation Sites.

Viruses. 2025-6-27

[3]
The HIV-1 envelope glycoprotein: structure, function and interactions with neutralizing antibodies.

Nat Rev Microbiol. 2025-7-23

[4]
SUMOylation of SARS-CoV-2 spike protein is a key target for broad-spectrum antiviral therapy.

Theranostics. 2025-5-25

[5]
Molecular mechanisms of immune evasion by host protein glycosylation of a bacterial immunogen used in nucleic acid vaccines.

bioRxiv. 2025-5-30

[6]
Inclusion of a retroviral protease enhances the immunogenicity of VLP-forming mRNA vaccines against HIV-1 or SARS-CoV-2 in mice.

Sci Transl Med. 2025-4-30

[7]
Expedient Assembly of Multiantennary -Glycans from Common -Glycan Cores with Orthogonal Protection for the Profiling of Glycan-Binding Proteins.

J Am Chem Soc. 2025-4-16

[8]
Glycan-reactive antibodies isolated from human HIV-1 vaccine trial participants show broad pathogen cross-reactivity.

bioRxiv. 2025-1-20

[9]
Structure of the Kaposi's sarcoma-associated herpesvirus gB in post-fusion conformation.

J Virol. 2025-2-25

[10]
Lysosomal enzyme binding to the cation-independent mannose 6-phosphate receptor is regulated allosterically by insulin-like growth factor 2.

Sci Rep. 2024-11-6

本文引用的文献

[1]
Global N-Glycan Site Occupancy of HIV-1 gp120 by Metabolic Engineering and High-Resolution Intact Mass Spectrometry.

ACS Chem Biol. 2017-2-17

[2]
Molecular Architecture of the Cleavage-Dependent Mannose Patch on a Soluble HIV-1 Envelope Glycoprotein Trimer.

J Virol. 2017-1-3

[3]
HIV Vaccine Design to Target Germline Precursors of Glycan-Dependent Broadly Neutralizing Antibodies.

Immunity. 2016-9-20

[4]
Natively glycosylated HIV-1 Env structure reveals new mode for antibody recognition of the CD4-binding site.

Nat Struct Mol Biol. 2016-10

[5]
Mapping the complete glycoproteome of virion-derived HIV-1 gp120 provides insights into broadly neutralizing antibody binding.

Sci Rep. 2016-9-8

[6]
Broadly Neutralizing Antibodies to HIV and Their Role in Vaccine Design.

Annu Rev Immunol. 2016-5-20

[7]
HIV-1 broadly neutralizing antibody precursor B cells revealed by germline-targeting immunogen.

Science. 2016-3-25

[8]
Integrated Omics and Computational Glycobiology Reveal Structural Basis for Influenza A Virus Glycan Microheterogeneity and Host Interactions.

Mol Cell Proteomics. 2016-6

[9]
Composition and Antigenic Effects of Individual Glycan Sites of a Trimeric HIV-1 Envelope Glycoprotein.

Cell Rep. 2016-3-22

[10]
Affinity Maturation of a Potent Family of HIV Antibodies Is Primarily Focused on Accommodating or Avoiding Glycans.

Immunity. 2015-12-15

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索