Nextflow支持可重复的计算工作流程。 - Suppr

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Nextflow enables reproducible computational workflows.

作者信息

Di Tommaso Paolo, Chatzou Maria, Floden Evan W, Barja Pablo Prieto, Palumbo Emilio, Notredame Cedric

机构信息

Centre for Genomic Regulation (CRG), The Barcelona Institute for Science and Technology, Barcelona, Spain.

Universitat Pompeu Fabra (UPF), Barcelona, Spain.

出版信息

Nat Biotechnol. 2017 Apr 11;35(4):316-319. doi: 10.1038/nbt.3820.

DOI:10.1038/nbt.3820

PMID:28398311

Abstract

摘要

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相似文献

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本文引用的文献

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AlgoRun: a Docker-based packaging system for platform-agnostic implemented algorithms.

Bioinformatics. 2016 Aug 1;32(15):2396-8. doi: 10.1093/bioinformatics/btw120. Epub 2016 Mar 2.

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Nucleic Acids Res. 2016 Jul 8;44(W1):W29-34. doi: 10.1093/nar/gkw292. Epub 2016 Apr 21.

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Nat Biotechnol. 2016 May;34(5):525-7. doi: 10.1038/nbt.3519. Epub 2016 Apr 4.

Translating RNA sequencing into clinical diagnostics: opportunities and challenges.

Nat Rev Genet. 2016 May;17(5):257-71. doi: 10.1038/nrg.2016.10. Epub 2016 Mar 21.

BioShaDock: a community driven bioinformatics shared Docker-based tools registry.

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Nature. 2016 Feb 4;530(7588):27-9. doi: 10.1038/530027a.

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The impact of Docker containers on the performance of genomic pipelines.

PeerJ. 2015 Sep 24;3:e1273. doi: 10.7717/peerj.1273. eCollection 2015.