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更新用于评估新生大鼠培养小脑颗粒神经元能量代谢的 C 代谢通量分析模型。

Updates to a C metabolic flux analysis model for evaluating energy metabolism in cultured cerebellar granule neurons from neonatal rats.

机构信息

Department of Biology, 110 Shoemaker Hall, University of Mississippi, University, MS 38677, USA.

Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.

出版信息

Neurochem Int. 2017 Oct;109:54-67. doi: 10.1016/j.neuint.2017.03.020. Epub 2017 Apr 13.


DOI:10.1016/j.neuint.2017.03.020
PMID:28412312
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5640475/
Abstract

A hexose phosphate recycling model previously developed to infer fluxes through the major glucose consuming pathways in cultured cerebellar granule neurons (CGNs) from neonatal rats metabolizing [1,2-C]glucose was revised by considering reverse flux through the non-oxidative pentose phosphate pathway (PPP) and symmetrical succinate oxidation within the tricarboxylic acid (TCA) cycle. The model adjusts three flux ratios to effect C distribution in the hexose, pentose, and triose phosphate pools, and in TCA cycle malate to minimize the error between predicted and measured C labeling in exported lactate (i.e., unlabeled, single-, double-, and triple-labeled; M, M1, M2, and M3, respectively). Inclusion of reverse non-oxidative PPP flux substantially increased the number of calculations but ultimately had relatively minor effects on the labeling of glycolytic metabolites. From the error-minimized solution in which the predicted M-M3 lactate differed by 0.49% from that measured by liquid chromatography-triple quadrupole mass spectrometry, the neurons exhibited negligible forward non-oxidative PPP flux. Thus, no glucose was used by the pentose cycle despite explicit consideration of hexose phosphate recycling. Mitochondria consumed only 16% of glucose while 45% was exported as lactate by aerobic glycolysis. The remaining 39% of glucose was shunted to pentose phosphates presumably for de novo nucleotide synthesis, but the proportion metabolized through the oxidative PPP vs. the reverse non-oxidative PPP could not be determined. The lactate exported as M1 (2.5%) and M3 (1.2%) was attributed to malic enzyme, which was responsible for 7.8% of pyruvate production (vs. 92.2% by glycolysis). The updated model is more broadly applicable to different cell types by considering bi-directional flux through the non-oxidative PPP. Its application to cultured neurons utilizing glucose as the sole exogenous substrate has demonstrated substantial oxygen-independent glucose utilization by aerobic glycolysis as well as the oxidative PPP and/or reverse non-oxidative PPP, but negligible glucose consumption by the pentose cycle.

摘要

先前开发的一个己糖磷酸循环模型用于从代谢[1,2-C]葡萄糖的新生大鼠小脑颗粒神经元(CGN)中推断主要葡萄糖消耗途径的通量,该模型通过考虑非氧化戊糖磷酸途径(PPP)的反向通量和三羧酸(TCA)循环中琥珀酸的对称氧化进行了修订。该模型调整了三个通量比,以调节己糖、戊糖和三磷酸糖池以及 TCA 循环苹果酸中的 C 分布,从而最小化预测和测量的出口乳酸(即未标记、单标记、双标记和三标记;M、M1、M2 和 M3)中的 C 标记之间的误差。包括反向非氧化 PPP 通量大大增加了计算次数,但最终对糖酵解代谢物的标记影响相对较小。从误差最小化的解决方案中,预测的 M-M3 乳酸与液相色谱-三重四极杆质谱法测量的乳酸相差 0.49%,神经元表现出可忽略不计的正向非氧化 PPP 通量。因此,尽管明确考虑了己糖磷酸循环,但戊糖循环没有消耗葡萄糖。线粒体仅消耗葡萄糖的 16%,而 45%作为有氧糖酵解的乳酸出口。其余 39%的葡萄糖被分流到戊糖磷酸中,大概用于从头核苷酸合成,但无法确定通过氧化 PPP 与反向非氧化 PPP 代谢的比例。作为 M1(2.5%)和 M3(1.2%)出口的乳酸归因于苹果酸酶,该酶负责丙酮酸产生的 7.8%(糖酵解为 92.2%)。通过考虑非氧化 PPP 的双向通量,更新后的模型更广泛地适用于不同的细胞类型。将其应用于利用葡萄糖作为唯一外源性底物的培养神经元,证明了有氧糖酵解以及氧化 PPP 和/或反向非氧化 PPP 具有大量的氧气独立葡萄糖利用,但戊糖循环的葡萄糖消耗可忽略不计。

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[3]
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[4]
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[5]
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[6]
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本文引用的文献

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J Neurochem. 2016-7

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(13)C metabolic flux analysis in neurons utilizing a model that accounts for hexose phosphate recycling within the pentose phosphate pathway.

Neurochem Int. 2016-2

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Neurochem Res. 2014

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