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LTR反转录元件转座机制:来自黑腹果蝇的经验教训。

Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster.

作者信息

Nefedova Lidia, Kim Alexander

机构信息

Department of Biology, Moscow State University, Moscow 119992, Russia.

出版信息

Viruses. 2017 Apr 16;9(4):81. doi: 10.3390/v9040081.

Abstract

Long terminal repeat (LTR) retrotransposons occupy a special place among all mobile genetic element families. The structure of LTR retrotransposons that have three open reading frames is identical to DNA forms of retroviruses that are integrated into the host genome. Several lines of evidence suggest that LTR retrotransposons share a common ancestry with retroviruses and thus are highly relevant to understanding mechanisms of transposition. Drosophila melanogaster is an exceptionally convenient model for studying the mechanisms of retrotransposon movement because many such elements in its genome are transpositionally active. Moreover, two LTRretrotransposons of D. melanogaster, gypsy and ZAM, have been found to have infectious properties and have been classified as errantiviruses. Despite numerous studies focusing on retroviral integration process, there is still no clear understanding of integration specificity in a target site. Most LTR retrotransposons non-specifically integrate into a target site. Site-specificity of integration at vertebrate retroviruses is rather relative. At the same time, sequence-specific integration is the exclusive property of errantiviruses and their derivatives with two open reading frames. The possible basis for the errantivirus integration specificity is discussed in the present review.

摘要

长末端重复序列(LTR)逆转录转座子在所有移动遗传元件家族中占据着特殊地位。具有三个开放阅读框的LTR逆转录转座子的结构与整合到宿主基因组中的逆转录病毒的DNA形式相同。多条证据表明,LTR逆转录转座子与逆转录病毒有着共同的祖先,因此与理解转座机制高度相关。黑腹果蝇是研究逆转录转座子移动机制的一个极其便利的模型,因为其基因组中的许多此类元件具有转座活性。此外,已发现黑腹果蝇的两个LTR逆转录转座子,即gypsy和ZAM,具有感染特性,并被归类为游走病毒。尽管有大量研究聚焦于逆转录病毒的整合过程,但对靶位点的整合特异性仍没有清晰的认识。大多数LTR逆转录转座子非特异性地整合到靶位点。脊椎动物逆转录病毒整合的位点特异性相当相对。与此同时,序列特异性整合是游走病毒及其具有两个开放阅读框的衍生物的独特属性。本综述讨论了游走病毒整合特异性的可能基础。

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