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利用依赖FLP的DamID方法的Dam修饰对染色质蛋白进行基因组图谱分析。

Genomic mapping of chromatin proteins by using Dam modification of an FLP-dependent DamID approach.

作者信息

Pindyurin A V

机构信息

Netherlands Cancer Institute, Amsterdam, 1066 CX, the Netherlands.

Institute of Molecular and Cellular Biology, SB RAS, Novosibirsk, 630090, Russia.

出版信息

Dokl Biochem Biophys. 2017 Jan;472(1):15-18. doi: 10.1134/S1607672917010057. Epub 2017 Apr 19.

Abstract

To identify interactions of chromatin proteins with the genome of the cell type of interest that is a part of heterologous tissues and organs of Drosophila, an FLP-dependent DamID approach was recently developed [4], which does not require sorting of cells or nuclei. Here, a modification of this approach, Dam, is described. The modified approach was validated by generating the binding pattern of the LAM protein, a component of the inner membrane of the nuclear envelope, with the genome of glial cells of the Drosophila larval central brains.

摘要

为了鉴定染色质蛋白与果蝇异源组织和器官中感兴趣的细胞类型的基因组之间的相互作用,最近开发了一种依赖FLP的DamID方法[4],该方法不需要对细胞或细胞核进行分选。在此,描述了这种方法的一种改进形式Dam。通过生成核被膜内膜成分LAM蛋白与果蝇幼虫中枢脑胶质细胞基因组的结合模式,对改进后的方法进行了验证。

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