Beckett Emma L, Jones Patrice, Veysey Martin, Duesing Konsta, Martin Charlotte, Furst John, Yates Zoe, Jablonski Nina G, Chaplin George, Lucock Mark
School of Environmental & Life Sciences, University of Newcastle, PO Box 127, Brush Rd, Ourimbah, NSW, 2258, Australia.
Medicine and Public Health, University of Newcastle, PO Box 127, Brush Rd, Ourimbah, NSW, 2258, Australia.
Am J Hum Biol. 2017 Sep 10;29(5). doi: 10.1002/ajhb.23010. Epub 2017 Apr 22.
The vitamin D receptor (VDR) is a member of the nuclear receptor family of transcription factors. We examined whether degree of VDR gene methylation acts as a molecular adaptation to light exposure. We explored this in the context of photoperiod at conception, recent UV irradiance at 305 nm, and gene-latitude effects.
Eighty subjects were examined for VDR gene-CpG island methylation density. VDR gene variants were also examined by PCR-RFLP.
Photoperiod at conception was significantly positively related to VDR methylation density, explaining 17% of the variance in methylation (r = 0.17; P = .001). Within this model, photoperiod at conception and plasma 25(OH)D independently predicted methylation density at the VDR-CpG island. Recent UV exposure at 305 nm led to a fivefold increase in mean methylation density (P = .02). Again, UV exposure and plasma 25(OH)D independently predicted methylation density at the VDR-CpG island. In the presence of the BsmI mutant allele, methylation density was increased (P = .01), and in the presence of the TaqI or FokI mutant allele, methylation density was decreased (P = .007 and .04 respectively). Multivariate modelling suggests plasma 25(OH)D, photoperiod at conception, recent solar irradiance, and VDR genotype combine as independent predictors of methylation at the VDR-CpG island, explaining 34% of the variance in methylation (R = 0.34, P < .0001).
Duration of early-life light exposure and strength of recent irradiance, along with latitudinal genetic factors, influence degree of VDR gene methylation consistent with this epigenetic phenomenon being a molecular adaptation to variation in ambient light exposure. Findings contribute to our understanding of human biology.
维生素D受体(VDR)是转录因子核受体家族的成员。我们研究了VDR基因甲基化程度是否作为对光照的一种分子适应性。我们在受孕时的光周期、近期305nm紫外线辐照度以及基因-纬度效应的背景下对此进行了探究。
对80名受试者进行了VDR基因-CpG岛甲基化密度检测。还通过PCR-RFLP检测了VDR基因变异。
受孕时的光周期与VDR甲基化密度显著正相关,解释了甲基化变异的17%(r = 0.17;P = 0.001)。在该模型中,受孕时的光周期和血浆25(OH)D独立预测了VDR-CpG岛的甲基化密度。近期305nm紫外线暴露导致平均甲基化密度增加了五倍(P = 0.02)。同样,紫外线暴露和血浆25(OH)D独立预测了VDR-CpG岛的甲基化密度。在存在BsmI突变等位基因的情况下,甲基化密度增加(P = 0.01),而在存在TaqI或FokI突变等位基因的情况下,甲基化密度降低(分别为P = 0.007和0.04)。多变量建模表明,血浆25(OH)D、受孕时的光周期、近期太阳辐照度和VDR基因型共同作为VDR-CpG岛甲基化的独立预测因子,解释了甲基化变异的34%(R = 0.34,P < 0.0001)。
生命早期光照持续时间和近期辐照强度,以及纬度遗传因素,影响VDR基因甲基化程度,这一表观遗传现象与对环境光照变化的分子适应性一致。研究结果有助于我们对人类生物学的理解。