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火地岛冰川前缘土壤微生物群落的功能生态学(智利)。

Functional ecology of soil microbial communities along a glacier forefield in Tierra del Fuego (Chile).

机构信息

Department of Biochemistry and Microbial Ecology, Museo Nacional de Ciencias Naturales, CSIC. Madrid, Spain.

Institute for Applied Ecology, Auckland University of Technology, Auckland, New Zealand.

出版信息

Int Microbiol. 2016 Sep;19(3):161-173. doi: 10.2436/20.1501.01.274.

DOI:10.2436/20.1501.01.274
PMID:28494086
Abstract

A previously established chronosequence from Pia Glacier forefield in Tierra del Fuego (Chile) containing soils of different ages (from bare soils to forest ones) is analyzed. We used this chronosequence as framework to postulate that microbial successional development would be accompanied by changes in functionality. To test this, the GeoChip functional microarray was used to identify diversity of genes involved in microbial carbon and nitrogen metabolism, as well as other genes related to microbial stress response and biotic interactions. Changes in putative functionality generally reflected succession-related taxonomic composition of soil microbiota. Major shifts in carbon fixation and catabolism were observed, as well as major changes in nitrogen metabolism. At initial microbial dominated succession stages, microorganisms could be mainly involved in pathways that help to increase nutrient availability, while more complex microbial transformations such as denitrification and methanogenesis, and later degradation of complex organic substrates, could be more prevalent at vegetated successional states. Shifts in virus populations broadly reflected changes in microbial diversity. Conversely, stress response pathways appeared relatively well conserved for communities along the entire chronosequence. We conclude that nutrient utilization is likely the major driver of microbial succession in these soils. [Int Microbiol 19(3):161-173 (2016)].

摘要

本文分析了来自火地岛皮亚冰川前地的一个已有年代序列的土壤,这些土壤具有不同的年龄(从裸土到森林土)。我们利用这个年代序列来假设微生物的演替发展将伴随着功能的变化。为了验证这一点,使用了 GeoChip 功能微阵列来鉴定参与微生物碳氮代谢以及与微生物应激反应和生物相互作用相关的其他基因的多样性。功能的变化通常反映了土壤微生物群落与演替相关的分类组成的变化。观察到碳固定和分解代谢的重大转变,以及氮代谢的重大变化。在初始的微生物主导的演替阶段,微生物可能主要参与有助于增加养分可用性的途径,而在植被演替阶段,更复杂的微生物转化,如反硝化和甲烷生成,以及后来的复杂有机底物的降解,可能更为普遍。病毒种群的变化广泛反映了微生物多样性的变化。相反,整个年代序列上的群落中,应激反应途径似乎相对较好地保持不变。我们得出结论,养分利用可能是这些土壤中微生物演替的主要驱动力。[Int Microbiol 19(3):161-173 (2016)]。

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