Carrel Margaret, Goto Michihiko, Schweizer Marin L, David Michael Z, Livorsi Daniel, Perencevich Eli N
Department of Geographical & Sustainability Sciences, University of Iowa, 305 Jessup Hall, Iowa City, IA 52242 USA.
Department of Epidemiology, University of Iowa, Iowa City, IA USA.
Antimicrob Resist Infect Control. 2017 Jun 5;6:55. doi: 10.1186/s13756-017-0212-1. eCollection 2017.
Changing phenotypic profiles of methicillin-susceptible (MSSA) isolates can indicate the emergence of novel sequence types (ST). The diffusion of MSSA ST can be tracked by combining established genotypic profiles with phenotypic surveillance data. ST398 emerged in New York City (NYC) and exhibits resistance to clindamycin and erythromycin but tetracycline susceptibility ("potential ST398"). Trends of potential ST398 were examined in a national cohort of all Veterans Health Administration patients with MSSA invasive infections during 2003-2014.
A retrospective cohort of all patients with MSSA invasive infections, defined as a positive clinical culture from a sterile site, during 2003-2014 was created. Only isolates tested against clindamycin, erythromycin and tetracycline were included. Annual hospital-level proportions of potential ST398 were compared according to facility distance from NYC and region.
A total of 34,025 patient isolates from 136 VA medical centers met the inclusion criteria. Of those, 4582 (13.5%) met the definition of potential ST398. Potential ST398 increased over the 12-year cohort and diffused outwards from NYC. Incidence Rate Ratios of >1.0 ( < 0.01) reflect increases in potential ST398 over time in hospitals nearer to NYC.
We observe an increase in the phenotypic profile of potential ST398 MSSA isolates in invasive infections in a national cohort of patients in the US. The increase is not evenly distributed across the US but appears to diffuse outwards from NYC. Novel MSSA strain emergence may have important clinical implications, particularly for the use of clindamycin for suspected infections.
耐甲氧西林金黄色葡萄球菌(MSSA)分离株表型特征的变化可能预示着新序列类型(ST)的出现。通过将已建立的基因型特征与表型监测数据相结合,可以追踪MSSA ST的传播情况。ST398在纽约市(NYC)出现,对克林霉素和红霉素耐药,但对四环素敏感(“潜在ST398”)。在2003 - 2014年期间,对美国退伍军人健康管理局所有患有MSSA侵袭性感染的患者进行了全国队列研究,以考察潜在ST398的趋势。
建立了一个回顾性队列,纳入2003 - 2014年期间所有患有MSSA侵袭性感染的患者,侵袭性感染定义为无菌部位临床培养阳性。仅纳入对克林霉素、红霉素和四环素进行检测的分离株。根据医疗机构与纽约市的距离和地区,比较每年医院层面潜在ST398的比例。
来自136个退伍军人医疗中心的34025例患者分离株符合纳入标准。其中,4582例(13.5%)符合潜在ST398的定义。在这12年的队列研究中,潜在ST398有所增加,并从纽约市向外扩散。发病率比值>1.0(<0.01)反映了在距离纽约市较近的医院中,潜在ST398随时间增加。
我们观察到在美国全国患者队列中,侵袭性感染的潜在ST398 MSSA分离株的表型特征有所增加。这种增加在美国各地分布不均,似乎是从纽约市向外扩散。新型MSSA菌株的出现可能具有重要的临床意义,特别是对于疑似感染使用克林霉素的情况。