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UDP-吡喃半乳糖变位酶催化的非氧化还原反应中还原型黄素的多种功能。

Multiple functionalities of reduced flavin in the non-redox reaction catalyzed by UDP-galactopyranose mutase.

作者信息

Sobrado Pablo, Tanner John J

机构信息

Department of Biochemistry, Virginia Tech, Blacksburg, VA 24061, USA.

Departments of Biochemistry and Chemistry, University of Missouri, Columbia, MO 65211, USA.

出版信息

Arch Biochem Biophys. 2017 Oct 15;632:59-65. doi: 10.1016/j.abb.2017.06.015. Epub 2017 Jun 24.

Abstract

Flavin cofactors are widely used by enzymes to catalyze a broad range of chemical reactions. Traditionally, flavins in enzymes are regarded as redox centers, which enable enzymes to catalyze the oxidation or reduction of substrates. However, a new class of flavoenzyme has emerged over the past quarter century in which the flavin functions as a catalytic center in a non-redox reaction. Here we introduce the unifying concept of flavin hot spots to understand and categorize the mechanisms and reactivities of both traditional and noncanonical flavoenzymes. The major hot spots of reactivity include the N5, C4a, and C4O atoms of the isoalloxazine, and the 2' hydroxyl of the ribityl chain. The role of hot spots in traditional flavoenzymes, such as monooxygenases, is briefly reviewed. A more detailed description of flavin hot spots in noncanonical flavoenzymes is provided, with a focus on UDP-galactopyranose mutase, where the N5 functions as a nucleophile that attacks the anomeric carbon atom of the substrate. Recent results from mechanistic enzymology, kinetic crystallography, and computational chemistry provide a complete picture of the chemical mechanism of UDP-galactopyranose mutase.

摘要

黄素辅因子被酶广泛用于催化各种各样的化学反应。传统上,酶中的黄素被视为氧化还原中心,使酶能够催化底物的氧化或还原反应。然而,在过去的四分之一个世纪里,出现了一类新的黄素酶,其中黄素在非氧化还原反应中作为催化中心发挥作用。在这里,我们引入黄素热点的统一概念,以理解和分类传统和非典型黄素酶的机制和反应活性。主要的反应热点包括异咯嗪的N5、C4a和C4O原子,以及核糖醇链的2'羟基。简要回顾了热点在传统黄素酶(如单加氧酶)中的作用。本文更详细地描述了非典型黄素酶中的黄素热点,重点是UDP-吡喃半乳糖变位酶,其中N5作为亲核试剂攻击底物的异头碳原子。来自机理酶学、动力学晶体学和计算化学的最新结果提供了UDP-吡喃半乳糖变位酶化学机制的完整图景。

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