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甜瓜(甜瓜属)中控制铁吸收基因的定位与特性分析

Mapping and Characterization of the Gene That Controls Iron Uptake in Melon ( L.).

作者信息

Ramamurthy Raghuprakash Kastoori, Waters Brian M

机构信息

Department of Agronomy and Horticulture, University of Nebraska-Lincoln, LincolnNE, United States.

出版信息

Front Plant Sci. 2017 Jun 14;8:1003. doi: 10.3389/fpls.2017.01003. eCollection 2017.

Abstract

Iron (Fe) deficiency in plants limits crop growth and productivity. Molecular mechanisms that plants use to sense and respond to Fe deficiency by coordinated expression of Fe-uptake genes are not fully understood. The C940-fe chlorotic melon () mutant known as is unable to upregulate Fe-uptake genes, however, the gene had not been identified. In this study, we used two F mapping populations to map and identify the gene as , a homolog of subgroup Ib genes from that are involved in transcriptional regulation of Fe-uptake genes in partnership with the gene. A Ty1-copia type retrotransposon insertion of 5.056 kb within is responsible for the defect in in , based on sequencing and expression analysis. This retrotransposon insertion results in multiple non-functional transcripts expected to result in an altered and truncated protein sequence. Hairy root transformation of plants using wild-type resulted in functional complementation of the chlorotic phenotype. Using a yeast-2-hybrid assay, the transcription factor Fit interacted with the wild-type bHLH38 protein, but did not interact with the bHLH38 protein, suggesting that heterodimer formation of Fit/bHLH38 to regulate Fe-uptake genes does not occur in roots. The second subgroup Ib gene in the melon genome is not functionally redundant to , in contrast to Arabidopsis where four subgroup Ib genes are functionally redundant. Whereas the Arabidopsis transcript levels are upregulated by Fe deficiency, melon was not regulated at the transcript level. Thus, the mutant may provide a platform for studying genes and proteins from other plant species.

摘要

植物缺铁会限制作物生长和生产力。植物通过协调铁吸收基因的表达来感知和响应缺铁的分子机制尚未完全明确。已知的C940-fe褪绿甜瓜()突变体无法上调铁吸收基因,然而,该基因尚未被鉴定出来。在本研究中,我们使用了两个F定位群体来定位并鉴定该基因,它是来自的Ib亚组基因的同源物,与基因共同参与铁吸收基因的转录调控。基于测序和表达分析,内5.056 kb的Ty1-copia型逆转座子插入导致了中的缺陷。这种逆转座子插入产生了多个无功能的转录本,预计会导致蛋白质序列改变和截短。用野生型对植物进行毛状根转化导致褪绿表型的功能互补。使用酵母双杂交试验,转录因子Fit与野生型bHLH38蛋白相互作用,但不与bHLH38蛋白相互作用,这表明在根中不会发生Fit/bHLH38异源二聚体形成来调控铁吸收基因。与拟南芥中四个Ib亚组基因功能冗余不同,甜瓜基因组中的第二个Ib亚组基因与功能并不冗余。拟南芥的转录水平在缺铁时会上调,而甜瓜的转录水平不受调控。因此,突变体可能为研究其他植物物种的基因和蛋白质提供一个平台。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/16eb/5470102/511065246d13/fpls-08-01003-g001.jpg

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