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在一名患有双侧黄斑缺损的中国患者中鉴定出两个杂合突变。

Two heterozygous mutations identified in one Chinese patient with bilateral macular coloboma.

作者信息

Li Tao, Lin Ying, Gao Hongbin, Chen Chuan, Zhu Yi, Liu Bingqian, Lian Yu, Li Yonghao, Zhou Wenli, Jiang Hongye, Li Haichun, Wu Qingxiu, Liang Xiaoling, Jin Chenjin, Huang Xinhua, Lu Lin

机构信息

State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat‑sen University, Guangzhou, Guangdong 510060, P.R. China.

Department of Toxicology, School of Public Health and Tropical Medicine, Southern Medical University, Guangzhou, Guangdong 510515, P.R. China.

出版信息

Mol Med Rep. 2017 Sep;16(3):2505-2510. doi: 10.3892/mmr.2017.6887. Epub 2017 Jun 29.

Abstract

Congenital macular coloboma is characterized by defined punched out atrophic lesions of the macula. The present study aimed to investigate the genetic alterations of one Chinese sporadic patient with bilateral large macular coloboma. Complete ophthalmic examinations, including best‑corrected visual acuity, slit‑lamp examination, fundus examination, fundus photograph and fundus fluorescein angiography imaging, Pentacam, and optical coherence tomography were performed on the patient. Genomic DNA was extracted from leukocytes in a peripheral blood sample collected from the patient, the patient's unaffected family members and from 200 unrelated control subjects from the same population. Next‑generation sequencing of the known genes involved in ocular disease was performed. The functional effects of the mutation were analyzed using Polymorphism Phenotyping (PolyPhen) and Sorting Intolerant From Tolerant (SIFT). One heterozygous bestrophin 1 (BEST1) mutation c.1037C>A (p.Pro346His, p.P346H) in exon 9 and one heterozygous regulating synaptic membrane exocytosis 1 (RIMS1) mutation c.3481A>G (p.Arg1161Gly, p.R1161G) in exon 23 were identified in the patient being investigated, but not in the unaffected family members or unrelated control subjects. Polyphen and SIFT predicted that the amino acid substitution p.P346H in the BEST1 protein is damaging. In addition, Polyphen predicted that the amino acid substitution p.R1161G in the RIM1 protein is damaging. The results of the current study have increased the mutation spectrums of BEST1 and RIMS1, and are valuable for improving the current genetic counseling process and developing novel therapeutic interventions for patients with macular coloboma.

摘要

先天性黄斑缺损的特征是黄斑区有明确的圆形萎缩性病变。本研究旨在调查一名患有双侧大黄斑缺损的中国散发性患者的基因改变情况。对该患者进行了全面的眼科检查,包括最佳矫正视力、裂隙灯检查、眼底检查、眼底照相和眼底荧光血管造影成像、眼前节分析系统(Pentacam)以及光学相干断层扫描。从该患者、其未患病的家庭成员以及来自同一人群的200名无关对照受试者采集的外周血样本中的白细胞中提取基因组DNA。对已知的与眼部疾病相关的基因进行了二代测序。使用多态性表型分析(PolyPhen)和耐受与不耐受排序(SIFT)分析了突变的功能影响。在被研究的患者中鉴定出一个位于外显子9的杂合性贝斯特罗芬1(BEST1)突变c.1037C>A(p.Pro346His,p.P346H)和一个位于外显子23的杂合性调节突触膜胞吐1(RIMS1)突变c.3481A>G(p.Arg1161Gly,p.R1161G),但在未患病的家庭成员或无关对照受试者中未发现。PolyPhen和SIFT预测BEST1蛋白中的氨基酸替代p.P346H具有损害性。此外,PolyPhen预测RIM1蛋白中的氨基酸替代p.R1161G具有损害性。本研究结果增加了BEST1和RIMS1的突变谱,对于改进当前的遗传咨询流程以及为黄斑缺损患者开发新的治疗干预措施具有重要价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b25/5548055/12fcc2952b63/MMR-16-03-2505-g00.jpg

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