MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824, USA.
Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.
Nat Plants. 2017 Jul 10;3:17089. doi: 10.1038/nplants.2017.89.
The orange carotenoid protein (OCP) is a structurally and functionally modular photoactive protein involved in cyanobacterial photoprotection. Using phylogenomic analysis, we have revealed two new paralogous OCP families, each distributed among taxonomically diverse cyanobacterial genomes. Based on bioinformatic properties and phylogenetic relationships, we named the new families OCP2 and OCPx to distinguish them from the canonical OCP that has been well characterized in Synechocystis, denoted hereafter as OCP1. We report the first characterization of a carotenoprotein photoprotective system in the chromatically acclimating cyanobacterium Tolypothrix sp. PCC 7601, which encodes both OCP1 and OCP2 as well as the regulatory fluorescence recovery protein (FRP). OCP2 expression could only be detected in cultures grown under high irradiance, surpassing expression levels of OCP1, which appears to be constitutive; under low irradiance, OCP2 expression was only detectable in a Tolypothrix mutant lacking the RcaE photoreceptor required for complementary chromatic acclimation. In vitro studies show that Tolypothrix OCP1 is functionally equivalent to Synechocystis OCP1, including its regulation by Tolypothrix FRP, which we show is structurally similar to the dimeric form of Synechocystis FRP. In contrast, Tolypothrix OCP2 shows both faster photoconversion and faster back-conversion, lack of regulation by the FRP, a different oligomeric state (monomer compared to dimer for OCP1) and lower fluorescence quenching of the phycobilisome. Collectively, these findings support our hypothesis that the OCP2 is relatively primitive. The OCP2 is transcriptionally regulated and may have evolved to respond to distinct photoprotective needs under particular environmental conditions such as high irradiance of a particular light quality, whereas the OCP1 is constitutively expressed and is regulated at the post-translational level by FRP and/or oligomerization.
橙色类胡萝卜素蛋白(OCP)是一种结构和功能上模块化的光活性蛋白,参与蓝细菌的光保护。通过系统基因组分析,我们揭示了两个新的同源 OCP 家族,每个家族都分布在分类学上不同的蓝细菌基因组中。基于生物信息学特性和系统发育关系,我们将新家族命名为 OCP2 和 OCPx,以将其与在聚球藻中得到充分表征的经典 OCP(此后称为 OCP1)区分开来。我们报告了首例在光色适应蓝细菌 Tolypothrix sp. PCC 7601 中对类胡萝卜素蛋白光保护系统的特征描述,该系统编码 OCP1 和 OCP2 以及调节荧光恢复蛋白(FRP)。仅在高光强下培养时才能检测到 OCP2 的表达,超过了 OCP1 的表达水平,OCP1 似乎是组成型表达;在低光照下,仅在缺乏互补光色适应所需的 RcaE 光受体的 Tolypothrix 突变体中才能检测到 OCP2 的表达。体外研究表明,Tolypothrix OCP1 在功能上与聚球藻 OCP1 等效,包括受 Tolypothrix FRP 调节,我们发现 Tolypothrix FRP 结构类似于聚球藻 FRP 的二聚体形式。相比之下,Tolypothrix OCP2 表现出更快的光转化和更快的返转化、不受 FRP 调节、不同的寡聚状态(OCP1 为二聚体,而 OCP2 为单体)以及藻胆体荧光猝灭程度较低。总的来说,这些发现支持我们的假设,即 OCP2 相对原始。OCP2 是转录调节的,可能是为了在特定环境条件下(例如特定光质的高光强)响应不同的光保护需求而进化的,而 OCP1 是组成型表达的,并受 FRP 和/或寡聚化的翻译后水平调节。