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基于蛋白质组学分析对铜绿假单胞菌中高效石油降解上调关键蛋白的探索

Exploration of Up-regulated Key Proteins in Pseudomonas Aeruginosa for High-efficiency Petroleum Degradation by Proteomic Analysis.

作者信息

Wang Jun-Di, Li Xu-Xiang, Qu Cheng-Tun

机构信息

School of Human Settlements and Civil Engineering, Xi'an Jiaotong University, Xi'an, 710049, People's Republic of China.

College of Chemistry and Chemical Engineering, Xi'an Shiyou University, Xi'an, 710065, People's Republic of China.

出版信息

Curr Microbiol. 2017 Oct;74(10):1178-1184. doi: 10.1007/s00284-017-1302-2. Epub 2017 Jul 11.

Abstract

In this work, proteomic analysis was used to identify the up-regulated key proteins of Pseudomonas aeruginosa (P6), a bacteria used in petroleum degradation, responsible for its high efficiency in degrading crude oil. Seventeen proteins were identified as up-regulated proteins by proteomic analysis and classified by bioinformatics analysis. The results indicated that most of the up-regulated proteins were responsible for P. aeruginosa (P6) survival under harsh environmental conditions and utilization crude oil as carbon source in a better way. The physiological processes, chemotaxis to carbon sources, terminal oxidation of carbons, carbon source uptake and nutrients transport, were associated with the up-regulated proteins in the study. The findings revealed the most influential proteins and set a clear direction for future research.

摘要

在这项工作中,蛋白质组学分析被用于鉴定铜绿假单胞菌(P6)中上调的关键蛋白,该细菌用于石油降解,因其在降解原油方面的高效率而闻名。通过蛋白质组学分析鉴定出17种上调蛋白,并通过生物信息学分析进行分类。结果表明,大多数上调蛋白负责铜绿假单胞菌(P6)在恶劣环境条件下的生存,并以更好的方式利用原油作为碳源。生理过程、对碳源的趋化作用、碳的末端氧化、碳源摄取和营养物质运输,都与本研究中的上调蛋白有关。这些发现揭示了最具影响力的蛋白质,并为未来的研究指明了明确的方向。

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