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代谢组学和蛋白质组学分析相结合揭示了不同亚种和菌株之间的不同特征,而在模式生物中的测试突出了益生菌特性。

Combination of Metabolomic and Proteomic Analysis Revealed Different Features among Subspecies and Strains While Testing in the Model Organism Highlighted Probiotic Properties.

作者信息

Zanni Elena, Schifano Emily, Motta Sara, Sciubba Fabio, Palleschi Claudio, Mauri Pierluigi, Perozzi Giuditta, Uccelletti Daniela, Devirgiliis Chiara, Miccheli Alfredo

机构信息

Department of Biology and Biotechnology "C. Darwin", Sapienza University of RomeRome, Italy.

Institute of Biomedical Technologies, National Research CouncilMilan, Italy.

出版信息

Front Microbiol. 2017 Jun 28;8:1206. doi: 10.3389/fmicb.2017.01206. eCollection 2017.

Abstract

represents a technologically relevant member of lactic acid bacteria, since the two subspecies and are widely associated with fermented dairy products. In the present work, we report the characterization of two commercial strains belonging to subspecies , and a novel strain previously isolated from a traditional fermented fresh cheese. A phenomic approach was performed by combining metabolomic and proteomic analysis of the three strains, which were subsequently supplemented as food source to the model organism , with the final aim to evaluate their possible probiotic effects. Restriction analysis of 16S ribosomal DNA revealed that the novel foodborne strain belonged to subspecies . Proteomic and metabolomic approaches showed differences in folate, aminoacid and sugar metabolic pathways among the three strains. Moreover, evaluation of lifespan, larval development, brood size, and bacterial colonization capacity demonstrated that subsp. diet exerted beneficial effects on nematodes. On the other hand, both subsp. strains affected lifespan and larval development. We have characterized three strains belonging to subspecies and highlighting their divergent origin. In particular, the two closely related isolates subspecies display different galactose metabolic capabilities. Moreover, the subspecies strain demonstrated potential probiotic features. Combination of platforms coupled with screening in the simple model organism is a powerful tool to characterize industrially relevant bacterial isolates.

摘要

代表乳酸菌中与技术相关的一个成员,因为两个亚种和与发酵乳制品广泛相关。在本研究中,我们报告了属于亚种的两株商业菌株以及一株先前从传统发酵新鲜奶酪中分离出的新菌株的特性。通过对这三株菌株进行代谢组学和蛋白质组学分析相结合的表型组学方法,随后将它们作为食物来源添加到模式生物中,最终目的是评估它们可能的益生菌作用。16S核糖体DNA的限制性分析表明,这种新的食源菌株属于亚种。蛋白质组学和代谢组学方法显示这三株菌株在叶酸、氨基酸和糖代谢途径上存在差异。此外,对线虫寿命、幼虫发育、产卵量和细菌定殖能力的评估表明,亚种的饮食对线虫有有益影响。另一方面,两个亚种的菌株都影响寿命和幼虫发育。我们已经对属于亚种和的三株菌株进行了特性分析,突出了它们不同的起源。特别是,两个密切相关的亚种分离株表现出不同的半乳糖代谢能力。此外,亚种的菌株表现出潜在的益生菌特性。在简单模式生物中结合平台与筛选是表征与工业相关的细菌分离株的有力工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1b/5487477/1fc775b54e40/fmicb-08-01206-g001.jpg

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