• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

来自淡水小龙虾的系统发育证据表明,洞穴适应并非进化的死胡同。

Phylogenetic evidence from freshwater crayfishes that cave adaptation is not an evolutionary dead-end.

作者信息

Stern David B, Breinholt Jesse, Pedraza-Lara Carlos, López-Mejía Marilú, Owen Christopher L, Bracken-Grissom Heather, Fetzner James W, Crandall Keith A

机构信息

Computational Biology Institute, The George Washington University, Ashburn, Virginia 20147.

Department of Biology, University of Florida, Gainesville, Florida.

出版信息

Evolution. 2017 Oct;71(10):2522-2532. doi: 10.1111/evo.13326. Epub 2017 Sep 20.

DOI:10.1111/evo.13326
PMID:28804900
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5656817/
Abstract

Caves are perceived as isolated, extreme habitats with a uniquely specialized biota, which long ago led to the idea that caves are "evolutionary dead-ends." This implies that cave-adapted taxa may be doomed for extinction before they can diversify or transition to a more stable state. However, this hypothesis has not been explicitly tested in a phylogenetic framework with multiple independently evolved cave-dwelling groups. Here, we use the freshwater crayfish, a group with dozens of cave-dwelling species in multiple lineages, as a system to test this hypothesis. We consider historical patterns of lineage diversification and habitat transition as well as current patterns of geographic range size. We find that while cave-dwelling lineages have small relative range sizes and rarely transition back to the surface, they exhibit remarkably similar diversification patterns to those of other habitat types and appear to be able to maintain a diversity of lineages through time. This suggests that cave adaptation is not a "dead-end" for freshwater crayfish, which has positive implications for our understanding of biodiversity and conservation in cave habitats.

摘要

洞穴被视为孤立的极端栖息地,拥有独特的专门生物群落,这一观点由来已久,即洞穴是“进化的死胡同”。这意味着适应洞穴生活的分类群在能够多样化或过渡到更稳定的状态之前可能注定会灭绝。然而,这一假设尚未在具有多个独立进化的穴居群体的系统发育框架中得到明确检验。在这里,我们以淡水小龙虾为研究对象,淡水小龙虾在多个谱系中有数十种穴居物种,以此来检验这一假设。我们考虑谱系多样化和栖息地转变的历史模式以及当前地理分布范围大小的模式。我们发现,虽然穴居谱系的相对分布范围较小,很少重新回到地表,但它们与其他栖息地类型的谱系多样化模式惊人地相似,并且似乎能够长期维持谱系的多样性。这表明洞穴适应对淡水小龙虾来说并非“死胡同”,这对于我们理解洞穴栖息地的生物多样性和保护具有积极意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62e1/5656817/ff424d5b5f38/EVO-71-2522-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62e1/5656817/72b04e8d1c63/EVO-71-2522-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62e1/5656817/ff424d5b5f38/EVO-71-2522-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62e1/5656817/72b04e8d1c63/EVO-71-2522-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62e1/5656817/ff424d5b5f38/EVO-71-2522-g003.jpg

相似文献

1
Phylogenetic evidence from freshwater crayfishes that cave adaptation is not an evolutionary dead-end.来自淡水小龙虾的系统发育证据表明,洞穴适应并非进化的死胡同。
Evolution. 2017 Oct;71(10):2522-2532. doi: 10.1111/evo.13326. Epub 2017 Sep 20.
2
Phototransduction Gene Expression and Evolution in Cave and Surface Crayfishes.洞穴小龙虾和地表小龙虾的光转导基因表达与进化
Integr Comp Biol. 2018 Sep 1;58(3):398-410. doi: 10.1093/icb/icy029.
3
The role of isolation on contrasting phylogeographic patterns in two cave crustaceans.隔离在两种洞穴甲壳类动物对比系统发育地理格局中的作用。
BMC Evol Biol. 2017 Dec 7;17(1):247. doi: 10.1186/s12862-017-1094-9.
4
Lithology and disturbance drive cavefish and cave crayfish occurrence in the Ozark Highlands ecoregion.岩性和干扰驱动奥沙克高地生态区洞穴鱼和洞穴小龙虾的出现。
Sci Rep. 2022 Nov 15;12(1):19559. doi: 10.1038/s41598-022-21791-3.
5
Subterranean phylogeography of freshwater crayfishes shows extensive gene flow and surprisingly large population sizes.淡水小龙虾的地下系统发育地理学显示出广泛的基因流动和惊人的大种群规模。
Mol Ecol. 2005 Dec;14(14):4259-73. doi: 10.1111/j.1365-294X.2005.02755.x.
6
Life-history specialization was not an evolutionary dead-end in Pyrenean cave beetles.生命史特化在比利牛斯洞穴甲虫中并不是进化的死胡同。
Proc Biol Sci. 2014 Feb 26;281(1781):20132978. doi: 10.1098/rspb.2013.2978. Print 2014 Apr 22.
7
Islands within islands: Diversification of tailless whip spiders (Amblypygi, Phrynus) in Caribbean caves.岛中之岛:加勒比海洞穴中无尾鞭蛛(蛛形纲,幽灵蛛科)的物种分化
Mol Phylogenet Evol. 2015 Dec;93:107-17. doi: 10.1016/j.ympev.2015.07.005. Epub 2015 Jul 26.
8
Molecular taxonomy in the dark: evolutionary history, phylogeography, and diversity of cave crayfish in the subgenus Aviticambarus, genus Cambarus.黑暗中的分子分类学:螯虾属阿维特螯虾亚属洞穴螯虾的进化史、系统地理学及多样性
Mol Phylogenet Evol. 2007 Feb;42(2):435-48. doi: 10.1016/j.ympev.2006.07.014. Epub 2006 Jul 27.
9
Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals, and origin of novel traits.洞穴鱼 Sinocyclocheilus 的进化具有速率转变、逆转和新特征起源的特点。
BMC Ecol Evol. 2021 Mar 17;21(1):45. doi: 10.1186/s12862-021-01776-y.
10
Biogeography, phylogeny, and morphological evolution of central Texas cave and spring salamanders.德克萨斯州中部洞穴和泉水蝾螈的生物地理学、系统发育和形态进化。
BMC Evol Biol. 2013 Sep 17;13:201. doi: 10.1186/1471-2148-13-201.

引用本文的文献

1
Correlated evolution of conspicuous colouration and burrowing in crayfish.小龙虾显著颜色与穴居习性的协同进化。
Proc Biol Sci. 2024 Jul;291(2026):20240632. doi: 10.1098/rspb.2024.0632. Epub 2024 Jul 10.
2
Evolutionary déjà vu? A case of convergent evolution in an ant-plant association.进化既视感?一个蚂蚁-植物共生关系中趋同进化的案例。
Proc Biol Sci. 2024 Jul;291(2026):20241214. doi: 10.1098/rspb.2024.1214. Epub 2024 Jul 10.
3
Living on the edge: Crayfish as drivers to anoxification of their own shelter microenvironment.

本文引用的文献

1
Troglomorphism, trichobothriotaxy and typhlochactid phylogeny (Scorpiones, Chactoidea): more evidence that troglobitism is not an evolutionary dead-end.洞穴适应性、栉毛排列与盲蛛蝎类系统发育(蝎目,盲蛛蝎科):更多证据表明洞穴适应性并非进化死胡同。
Cladistics. 2010 Apr;26(2):117-142. doi: 10.1111/j.1096-0031.2009.00277.x. Epub 2009 Sep 10.
2
A supertree pipeline for summarizing phylogenetic and taxonomic information for millions of species.一种用于汇总数百万物种的系统发育和分类信息的超级树管道。
PeerJ. 2017 Mar 1;5:e3058. doi: 10.7717/peerj.3058. eCollection 2017.
3
Notes on the Statistical Power of the Binary State Speciation and Extinction (BiSSE) Model.
生活在边缘:淡水小龙虾作为自身栖息微环境缺氧化的驱动者。
PLoS One. 2024 Jan 2;19(1):e0287888. doi: 10.1371/journal.pone.0287888. eCollection 2024.
4
A Phylogenetic Framework to Simulate Synthetic Interspecies RNA-Seq Data.一种模拟种间 RNA-Seq 数据的系统发育框架。
Mol Biol Evol. 2023 Jan 4;40(1). doi: 10.1093/molbev/msac269.
5
On the surface or down below: Field observations reveal a high degree of surface activity in a burrowing crayfish, the Little Brown Mudbug (Lacunicambarus thomai).在表面或下方:实地观察发现,穴居小龙虾(拉氏沼虾)的表面活动程度很高。
PLoS One. 2022 Oct 14;17(10):e0273540. doi: 10.1371/journal.pone.0273540. eCollection 2022.
6
Revising the Freshwater to gen. et comb. nov., and Description of Two New Species.将淡水属修订为新组合属,并描述两个新物种。
Microorganisms. 2022 Mar 17;10(3):636. doi: 10.3390/microorganisms10030636.
7
A phylogenomic framework, evolutionary timeline and genomic resources for comparative studies of decapod crustaceans.十足目甲壳动物比较研究的系统基因组框架、进化时间线和基因组资源。
Proc Biol Sci. 2019 Apr 24;286(1901):20190079. doi: 10.1098/rspb.2019.0079.
8
The Evolution of Gene Expression Underlying Vision Loss in Cave Animals.洞穴动物视力丧失相关基因表达的演变。
Mol Biol Evol. 2018 Aug 1;35(8):2005-2014. doi: 10.1093/molbev/msy106.
二元状态物种形成与灭绝(BiSSE)模型的统计功效注释
Evol Bioinform Online. 2016 Jul 26;12:165-74. doi: 10.4137/EBO.S39732. eCollection 2016.
4
Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees.交互式生命树(iTOL)v3:用于展示和注释系统发育树及其他树状图的在线工具。
Nucleic Acids Res. 2016 Jul 8;44(W1):W242-5. doi: 10.1093/nar/gkw290. Epub 2016 Apr 19.
5
Detecting Hidden Diversification Shifts in Models of Trait-Dependent Speciation and Extinction.检测性状依赖的物种形成和灭绝模型中的隐藏多样化转变。
Syst Biol. 2016 Jul;65(4):583-601. doi: 10.1093/sysbio/syw022. Epub 2016 Mar 25.
6
Is specialization an evolutionary dead end? Testing for differences in speciation, extinction and trait transition rates across diverse phylogenies of specialists and generalists.专业化是进化的死胡同吗?检验 specialist 和 generalist 的不同系统发育中物种形成、灭绝和性状转变速率的差异。
J Evol Biol. 2016 Jun;29(6):1257-67. doi: 10.1111/jeb.12867. Epub 2016 Apr 4.
7
Machine Learning Biogeographic Processes from Biotic Patterns: A New Trait-Dependent Dispersal and Diversification Model with Model Choice By Simulation-Trained Discriminant Analysis.基于生物模式的机器学习生物地理过程:一种新的基于性状的扩散与多样化模型及通过模拟训练判别分析进行模型选择
Syst Biol. 2016 May;65(3):525-45. doi: 10.1093/sysbio/syv121. Epub 2015 Dec 28.
8
Model Adequacy and the Macroevolution of Angiosperm Functional Traits.模型适切性与被子植物功能性状的宏观演化
Am Nat. 2015 Aug;186(2):E33-50. doi: 10.1086/682022. Epub 2015 Jun 12.
9
Synthesis of phylogeny and taxonomy into a comprehensive tree of life.将系统发育学和分类学整合为一个全面的生命之树。
Proc Natl Acad Sci U S A. 2015 Oct 13;112(41):12764-9. doi: 10.1073/pnas.1423041112. Epub 2015 Sep 18.
10
Model inadequacy and mistaken inferences of trait-dependent speciation.性状依赖物种形成的模型不足与错误推断。
Syst Biol. 2015 Mar;64(2):340-55. doi: 10.1093/sysbio/syu131. Epub 2015 Jan 19.