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来自巴西仙人掌的新内生菌物种及新属的描述

New endophytic species from cacti in Brazil, and description of gen. nov.

作者信息

Bezerra Jadson D P, Sandoval-Denis Marcelo, Paiva Laura M, Silva Gladstone A, Groenewald Johannes Z, Souza-Motta Cristina M, Crous Pedro W

机构信息

Departamento de Micologia Prof. Chaves Batista, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, s/n, Centro de Biociências, Cidade Universitária, CEP: 50670-901, Recife, PE, Brazil.

Programa de Pós-Graduação em Biologia de Fungos (PPG-BF), Departamento de Micologia Prof. Chaves Batista, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, s/n, Centro de Biociências, Cidade Universitária, CEP: 50670-901, Recife, PE, Brazil.

出版信息

IMA Fungus. 2017 Jun;8(1):77-97. doi: 10.5598/imafungus.2017.08.01.06. Epub 2017 May 1.

Abstract

Brazil harbours a unique ecosystem, the Caatinga, which belongs to the tropical dry forest biome. This region has an important diversity of organisms, and recently several new fungal species have been described from different hosts and substrates within it. During a survey of fungal endophyte diversity from cacti in this forest, we isolated cladosporium-like fungi that were subjected to morphological and multigene phylogenetic analyses including , ITS, LSU, and gene sequences. Based on these analyses we identified two new species belonging to the genus , described here as and spp. nov., isolated from subsp. and , respectively. To improve the species recognition and assess species diversity in we studied all ex-type strains of the genus, for which , and barcodes were also generated. After phylogenetic reconstruction using five loci, we differentiated 13 species in the genus. and are synonymized based on their phylogenetic position and limited number of unique nucleotide differences. Six strains previously assigned to , including the ex-type strain (CBS 131317) of that species, were found to belong to an undescribed genus here named as gen. nov., with comb. nov. as type species. Furthermore, this study proposes the , ITS, and as main phylogenetic loci to recognise species.

摘要

巴西拥有一个独特的生态系统——卡廷加,它属于热带干燥森林生物群落。该地区生物多样性丰富,最近在其范围内不同宿主和基质上发现了几种新的真菌物种。在对这片森林中仙人掌的真菌内生菌多样性进行调查时,我们分离出了类似枝孢菌的真菌,并对其进行了形态学和多基因系统发育分析,包括ITS、LSU和基因序列。基于这些分析,我们鉴定出了属于该属的两个新物种,分别从亚种和中分离得到,在此描述为和新物种。为了提高该属物种的识别率并评估其物种多样性,我们研究了该属的所有模式菌株,并生成了、和条形码。在使用五个基因座进行系统发育重建后,我们区分出了该属的13个物种。根据它们的系统发育位置和有限数量的独特核苷酸差异,和被视为同义词。先前归为的六个菌株,包括该物种的模式菌株(CBS 131317),被发现属于一个未描述的属,在此命名为新属,以新组合为模式种。此外,本研究提出、ITS、和作为识别该属物种的主要系统发育基因座。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a622/5493539/453fbb439b5a/ima-8-77-g001.jpg

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