Bobokova T S, Lemskaya N A, Kolesnikova I S, Yudkin D V
Institute of Molecular and Cellular Biology, Siberian Branch, Russian Academy of Sciences, Novosibirsk, 630090 Russia.
Novosibirsk State University, Novosibirsk, 630090 Russia.
Mol Biol (Mosk). 2017 Jul-Aug;51(4):704-709. doi: 10.7868/S0026898417040061.
Fragile X syndrome is one of the most common reasons for human hereditary mental retardation. It is associated with the expansion of CGG repeats in the 5'-untranslated region of the FMR1 gene, which results in the suppression of its expression and the development of the disease. At present, methods based on PCR and Southern blot analysis are used for diagnostics of the fragile X syndrome. The presence of a fragile site FRAXA on the X chromosome is typical for patients with this pathology. We developed a method of visualizing this site in cell cultures obtained from patients using the fluorescent in situ hybridization (FISH) and the combination of two probes. The method allows one to detect five types of signals on the X chromosome, three of which are normal, while two are associated with the emergence of fragile site FRAXA. An analysis of the distribution of all signal types in cell lines from healthy individuals and patients with fragile X syndrome demonstrated that the method allows one to determine differences between lines with a high statistical significance and that it is applicable to detecting cells that are carriers of the syndrome.
脆性X综合征是人类遗传性智力障碍最常见的原因之一。它与FMR1基因5'-非翻译区中CGG重复序列的扩增有关,这会导致该基因表达受到抑制并引发疾病。目前,基于聚合酶链反应(PCR)和Southern印迹分析的方法用于脆性X综合征的诊断。患有这种病症的患者典型特征是X染色体上存在脆性位点FRAXA。我们开发了一种方法,利用荧光原位杂交(FISH)和两种探针的组合,在从患者获取的细胞培养物中可视化该位点。该方法能够在X染色体上检测到五种类型的信号,其中三种是正常的,而另外两种与脆性位点FRAXA的出现有关。对来自健康个体和脆性X综合征患者的细胞系中所有信号类型分布的分析表明,该方法能够以高统计学意义确定细胞系之间的差异,并且适用于检测携带该综合征的细胞。