Kumar Santosh, Spiro Stephen
Department of Biological Sciences, University of Texas at Dallas, Richardson, Texas, USA.
mSphere. 2017 Sep 6;2(5). doi: 10.1128/mSphereDirect.00350-17. eCollection 2017 Sep-Oct.
The genome of the denitrifying bacterium predicts the expression of a small heme-containing nitric oxide (NO) binding protein, H-NOX. The genome organization and prior work in other bacteria suggest that H-NOX interacts with a diguanylate cyclase that cyclizes GTP to make cyclic di-GMP (cdGMP). Since cdGMP frequently regulates attached growth as a biofilm, we first established conditions for biofilm development by . We found that adhesion to a polystyrene surface is strongly stimulated by the addition of 10 mM Ca to rich media. The genome encodes at least 11 repeats-in-toxin family proteins that are predicted to be secreted by the type I secretion system (TISS). We deleted the genes encoding the TISS and found that the mutant is almost completely deficient for attached growth. Adjacent to the TISS genes there is a potential open reading frame encoding a 2,211-residue protein with 891 Asp-Ala repeats. This protein is also predicted to bind calcium and to be a TISS substrate, and a mutant specifically lacking this protein is deficient in biofilm formation. By analysis of mutants and promoter reporter fusions, we show that biofilm formation is stimulated by NO generated endogenously by the respiratory reduction of nitrite. A mutant lacking both predicted diguanylate cyclases encoded in the genome overproduces biofilm, implying that cdGMP is a negative regulator of attached growth. Our data are consistent with a model in which there are H-NOX-dependent and -independent pathways by which NO stimulates biofilm formation. The bacterium is a model for the process of denitrification, by which nitrate is reduced to dinitrogen during anaerobic growth. Denitrification is important for soil fertility and greenhouse gas emission and in waste and water treatment processes. The ability of bacteria to grow as a biofilm attached to a solid surface is important in many different contexts. In this paper, we report that attached growth of is stimulated by nitric oxide, an intermediate in the denitrification pathway. We also show that calcium ions stimulate attached growth, and we identify a large calcium binding protein that is required for growth on a polystyrene surface. We identify components of a signaling pathway through which nitric oxide may regulate biofilm formation. Our results point to an intimate link between metabolic processes and the ability of to grow attached to a surface.
反硝化细菌的基因组预测会表达一种含血红素的小分子一氧化氮(NO)结合蛋白,即H-NOX。基因组结构以及在其他细菌中的前期研究表明,H-NOX与一种双鸟苷酸环化酶相互作用,该酶将GTP环化生成环二鸟苷酸(cdGMP)。由于cdGMP常作为生物膜调控附着生长,我们首先通过……建立了生物膜形成的条件。我们发现,向丰富培养基中添加10 mM Ca可强烈刺激其对聚苯乙烯表面的黏附。该基因组编码至少11种毒素重复序列家族蛋白,预计由I型分泌系统(TISS)分泌。我们删除了编码TISS的基因,发现突变体在附着生长方面几乎完全缺陷。在TISS基因附近有一个潜在的开放阅读框,编码一种含有891个天冬氨酸-丙氨酸重复序列的2211个残基的蛋白。该蛋白预计也能结合钙且是TISS的底物,一个特异性缺失该蛋白的突变体在生物膜形成方面存在缺陷。通过对突变体和启动子报告基因融合体的分析,我们表明生物膜形成受到亚硝酸盐呼吸还原内源性产生的NO的刺激。一个缺失基因组中两个预测的双鸟苷酸环化酶的突变体生物膜过度产生,这意味着cdGMP是附着生长的负调控因子。我们的数据与一个模型相符,即存在依赖H-NOX和不依赖H-NOX的途径,通过这些途径NO刺激生物膜形成。这种细菌是反硝化过程的模型,在厌氧生长过程中硝酸盐被还原为氮气。反硝化作用对土壤肥力、温室气体排放以及废物和水处理过程都很重要。细菌以附着在固体表面的生物膜形式生长的能力在许多不同情况下都很重要。在本文中,我们报告这种细菌的附着生长受到反硝化途径中的中间体一氧化氮的刺激。我们还表明钙离子刺激附着生长,并且我们鉴定出一种在聚苯乙烯表面生长所必需的大型钙结合蛋白。我们鉴定出一条信号通路的组成部分,一氧化氮可能通过该通路调控生物膜形成。我们的结果表明代谢过程与这种细菌附着在表面生长的能力之间存在紧密联系。
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