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通过光谱学和分子对接研究醛脱氢酶与对乙酰氨基酚的相互作用。

Interaction of Aldehyde dehydrogenase with acetaminophen as examined by spectroscopies and molecular docking.

作者信息

Kolawole Ayodele O

机构信息

Department of Biochemistry, The Federal University of Technology, Akure, Nigeria.

出版信息

Biochem Biophys Rep. 2017 Apr 6;10:198-207. doi: 10.1016/j.bbrep.2017.03.010. eCollection 2017 Jul.

Abstract

The interaction of acetaminophen, a non-substrate anionic ligand, with Aldehyde Dehydrogenase was studied by fluorescence, UV-Vis absorption, and circular dichroism spectroscopies under simulated physiological conditions. The fluorescence spectra and data generated showed that acetaminophen binding to ALDH is purely dynamic quenching mechanism. The acetaminophen-ALDH is kinetically rapid reversible interaction with a binding constant, , of 4.91×10 L mol. There was an existence of second binding site of ALDH for acetaminophen at saturating acetaminophen concentration. The binding sites were non-cooperative. The thermodynamic parameters obtained suggest that Van der Waal force and hydrogen bonding played a major role in the binding of acetaminophen to ALDH. The interaction caused perturbation of the ALDH structures with an obvious reduction in the α-helix. The binding distance of 4.43 nm was obtained between Acetaminophen and ALDH. Using Ficoll 400 as macro-viscosogen and glycerol as micro-viscosogen, Stoke-Einstein empirical plot demonstrated that acetaminophen-ALDH binding was diffusion controlled. Molecular docking showed the participation of some amino acids in the complex formation with -5.3 kcal binding energy. With these, ALDH might not an excipient detoxifier of acetaminophen but could be involved in its pegylation/encapsulation.

摘要

在模拟生理条件下,通过荧光光谱、紫外可见吸收光谱和圆二色光谱研究了对乙酰氨基酚(一种非底物阴离子配体)与醛脱氢酶的相互作用。荧光光谱及所生成的数据表明,对乙酰氨基酚与醛脱氢酶的结合是纯粹的动态猝灭机制。对乙酰氨基酚 - 醛脱氢酶是一种动力学上快速可逆的相互作用,结合常数为4.91×10⁴ L/mol。在对乙酰氨基酚浓度饱和时,醛脱氢酶存在第二个对乙酰氨基酚结合位点。这些结合位点是非协同的。所获得的热力学参数表明,范德华力和氢键在对乙酰氨基酚与醛脱氢酶的结合中起主要作用。这种相互作用导致醛脱氢酶结构发生扰动,α - 螺旋明显减少。对乙酰氨基酚与醛脱氢酶之间的结合距离为4.43 nm。使用聚蔗糖400作为宏观粘度调节剂和甘油作为微观粘度调节剂,斯托克斯 - 爱因斯坦经验图表明对乙酰氨基酚 - 醛脱氢酶的结合是扩散控制的。分子对接显示一些氨基酸参与了复合物的形成,结合能为 - 5.3 kcal。由此可知,醛脱氢酶可能不是对乙酰氨基酚的辅料解毒剂,但可能参与其聚乙二醇化/包封过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9f9/5614660/7c8efcbe2d89/fx1.jpg

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