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由Trr和哺乳动物类COMPASS蛋白在增强子处催化的组蛋白H3K4单甲基化对于发育和生存能力而言并非必需。

Histone H3K4 monomethylation catalyzed by Trr and mammalian COMPASS-like proteins at enhancers is dispensable for development and viability.

作者信息

Rickels Ryan, Herz Hans-Martin, Sze Christie C, Cao Kaixiang, Morgan Marc A, Collings Clayton K, Gause Maria, Takahashi Yoh-Hei, Wang Lu, Rendleman Emily J, Marshall Stacy A, Krueger Annika, Bartom Elizabeth T, Piunti Andrea, Smith Edwin R, Abshiru Nebiyu A, Kelleher Neil L, Dorsett Dale, Shilatifard Ali

机构信息

Department of Biochemistry and Molecular Genetics, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.

Stowers Institute for Medical Research, Kansas City, Missouri, USA.

出版信息

Nat Genet. 2017 Nov;49(11):1647-1653. doi: 10.1038/ng.3965. Epub 2017 Oct 2.

Abstract

Histone H3 lysine 4 monomethylation (H3K4me1) is an evolutionarily conserved feature of enhancer chromatin catalyzed by the COMPASS-like methyltransferase family, which includes Trr in Drosophila melanogaster and MLL3 (encoded by KMT2C) and MLL4 (encoded by KMT2D) in mammals. Here we demonstrate that Drosophila embryos expressing catalytically deficient Trr eclose and develop to productive adulthood. Parallel experiments with a trr allele that augments enzyme product specificity show that conversion of H3K4me1 at enhancers to H3K4me2 and H3K4me3 is also compatible with life and results in minimal changes in gene expression. Similarly, loss of the catalytic SET domains of MLL3 and MLL4 in mouse embryonic stem cells (mESCs) does not disrupt self-renewal. Drosophila embryos with trr alleles encoding catalytic mutants manifest subtle developmental abnormalities when subjected to temperature stress or altered cohesin levels. Collectively, our findings suggest that animal development can occur in the context of Trr or mammalian COMPASS-like proteins deficient in H3K4 monomethylation activity and point to a possible role for H3K4me1 on cis-regulatory elements in specific settings to fine-tune transcriptional regulation in response to environmental stress.

摘要

组蛋白H3赖氨酸4单甲基化(H3K4me1)是增强子染色质的一个进化保守特征,由COMPASS样甲基转移酶家族催化,该家族包括果蝇中的Trr以及哺乳动物中的MLL3(由KMT2C编码)和MLL4(由KMT2D编码)。在此,我们证明表达催化缺陷型Trr的果蝇胚胎能够羽化并发育至具有繁殖能力的成年期。用增强酶产物特异性的trr等位基因进行的平行实验表明,增强子处的H3K4me1向H3K4me2和H3K4me3的转化也与生命兼容,并且导致基因表达的变化最小。同样,小鼠胚胎干细胞(mESCs)中MLL3和MLL4的催化SET结构域缺失不会破坏自我更新。携带编码催化突变体的trr等位基因的果蝇胚胎在受到温度胁迫或黏连蛋白水平改变时会表现出细微的发育异常。总的来说,我们的研究结果表明,动物发育可以在缺乏H3K4单甲基化活性的Trr或哺乳动物COMPASS样蛋白的情况下发生,并指出H3K4me1在特定环境中的顺式调控元件上可能发挥作用,以响应环境胁迫微调转录调控。

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