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博物馆基因组学证实,豪勋爵岛竹节虫幸免于灭绝。

Museum Genomics Confirms that the Lord Howe Island Stick Insect Survived Extinction.

机构信息

Ecology and Evolution Unit, Okinawa Institute of Science and Technology, Tancha 1919-1, Onna-son, Okinawa, 904-0495 Japan; Research School of Biology, Australian National University, Canberra, ACT 2601, Australia.

Australian National Insect Collection, CSIRO, Clunies Ross St., Acton, ACT 2601, Australia.

出版信息

Curr Biol. 2017 Oct 23;27(20):3157-3161.e4. doi: 10.1016/j.cub.2017.08.058. Epub 2017 Oct 5.

Abstract

The Lord Howe Island stick insect, Dryococelus australis, was once common on the island but was driven to extinction after the arrival of ship rats in the early 20 century [1, 2]. It was thought to be extinct for decades, until a tiny population of similar-looking stick insects was discovered 20 km away, on the islet of Ball's Pyramid, in 2001 [2]. Individuals from this population are currently being reared in Australia and elsewhere in the world, with the eventual goal of recolonizing Lord Howe Island [3]. Recent surveys of the wild population on Ball's Pyramid suggest that it is among the world's rarest species. However, there are significant morphological differences between Ball's Pyramid and museum specimens, and there has never been a genetic confirmation of the rediscovered population's species identity. Because Dryococelus is monotypic, there are also no known extant relatives for comparison. Using shotgun genomic data from the Ball's Pyramid population, we assembled a draft genome and the complete mitochondrial genome. We found that the genome is massive, over 4 Gb in size, and is most likely hexaploid. We re-sequenced mitochondrial genomes from historic museum specimens collected on Lord Howe Island before the extinction event. Sequence divergence between the two populations is less than 1% and is within the range of intraspecific differences between the museum specimens, suggesting that they are conspecific and that D. australis has successfully evaded extinction so far. This work highlights the importance of museum collections for taxonomic validation in the context of ongoing conservation efforts.

摘要

豪勋爵岛竹节虫,Dryococelus australis,曾经在岛上很常见,但在 20 世纪初船鼠到达后,它就灭绝了[1,2]。人们认为它已经灭绝了几十年,直到 2001 年在 20 公里外的巴尔金字塔小岛发现了一个类似的竹节虫小种群[2]。目前正在澳大利亚和世界其他地方饲养这个种群的个体,最终目标是重新引入豪勋爵岛[3]。最近对巴尔金字塔岛上野生种群的调查表明,它是世界上最稀有的物种之一。然而,巴尔金字塔岛和博物馆标本之间存在显著的形态差异,而且从未对重新发现的种群的物种身份进行过基因确认。由于 Dryococelus 是单型的,也没有已知的现存亲属可供比较。我们使用来自巴尔金字塔岛种群的鸟枪法基因组数据,组装了一个基因组草图和完整的线粒体基因组。我们发现基因组非常大,超过 40 亿个碱基对,很可能是六倍体。我们重新测序了豪勋爵岛上灭绝事件前收集的博物馆标本的线粒体基因组。两个种群之间的序列差异小于 1%,并且在博物馆标本之间的种内差异范围内,这表明它们是同一种,并且 D. australis 迄今为止成功地避免了灭绝。这项工作强调了博物馆收藏在持续保护努力中对分类学验证的重要性。

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