Zhang Jingjing, Matsuo Toshihiko
Department of Ophthalmology, Okayama University Graduate School of Medicine, Dentistry, and Pharmaceutical Sciences, Okayama City, Okayama, Japan.
PeerJ. 2017 Oct 17;5:e3935. doi: 10.7717/peerj.3935. eCollection 2017.
BACKGROUND/AIM: Strabismus is a common condition with misalignment between two eyes that may lead to decrease of visual acuity, lack of binocularity, and diplopia. It is caused by heterogeneous environmental and genetic risk factors. Our previous research has identified new chromosomal susceptibility loci in 4q28.3 and 7q31.2 regions for comitant strabismus in Japanese families. We conducted a verification study by linkage analysis to narrow the chromosomal loci down to a single gene.
From Japanese and U.S. databases, 24 rsSNPs and 233 rsSNPs were chosen from the 4q28.3 and 7q31.2 region, respectively, and were typed in 108 affected subjects and 96 unaffected subjects of 58 families with primary and non-syndromic comitant strabismus. Three major analytical methods were used: transmission disequilibrium test (TDT), TDT allowing for errors (TDTae), and linkage analysis under dominant and recessive inheritance.
The SNPs with significant values in TDT and TDTae were located solely at the gene, microsomal glutathione S-transferase 2 (), on chromosome 4q28.3 locus. In contrast, significant SNPs were dispersed in a few genes, containing wingless-type MMTV integration site family member 2 (), on chromosome 7q31.2 locus. The distribution of significant SNPs on the 7q31.2 locus showed that only the to region in the same big haplotype block contained significant SNPs for all three methods of linkage analysis.
This study suggests that and are potential candidates for comitant strabismus in Japanese population.
背景/目的:斜视是一种常见病症,双眼存在眼位偏斜,可能导致视力下降、缺乏双眼视功能和复视。它由多种环境和遗传风险因素引起。我们之前的研究已在日本家族中确定了4q28.3和7q31.2区域存在共同性斜视的新染色体易感位点。我们通过连锁分析进行了一项验证研究,以将染色体位点缩小至单个基因。
从日本和美国数据库中,分别从4q28.3区域和7q31.2区域选择了24个单核苷酸多态性(rsSNP)和233个rsSNP,并在58个原发性和非综合征性共同性斜视家族的108名患病个体和96名未患病个体中进行基因分型。使用了三种主要分析方法:传递不平衡检验(TDT)、允许误差的TDT(TDTae)以及显性和隐性遗传下的连锁分析。
在TDT和TDTae中具有显著P值的SNP仅位于4q28.3位点的微粒体谷胱甘肽S - 转移酶2(MGST2)基因上。相比之下,显著的SNP分散在7q31.2位点的几个基因中,包括无翅型MMTV整合位点家族成员2(WNT2)。7q31.2位点上显著SNP的分布表明,仅同一大单体型块中的1.5kb至2.0kb区域包含所有三种连锁分析方法的显著SNP。
本研究表明,MGST2和WNT2是日本人群中共同性斜视的潜在候选基因。