Park Sung Man, Lee Yu Ran, Kang Do Won, Kim Hong Lae, Kwon Chan Ho
Department of Chemistry, College of Natural Sciences and Institute for Molecular Science and Fusion Technology, Kangwon National University, Chuncheon 24341, Korea.
Phys Chem Chem Phys. 2017 Nov 22;19(45):30362-30369. doi: 10.1039/c7cp05646j.
One-photon vacuum ultraviolet mass-analyzed threshold ionization (VUV-MATI) spectroscopy was used to characterize the essential conformations of tetrahydrofuran (THF) and thus determine the stereochemistry of the furanose ring constituting the backbones of DNA and RNA. Since the VUV-MATI spectrum of THF exactly corresponds to the vibrational spectrum of the gas-phase THF cation, the above cation was detected using time-of-flight mass spectrometry featuring the delayed pulsed-field ionization of the target in high Rydberg states by scanning the wavelength of the VUV pulse across the region of the vibrational spectrum. The position of the 0-0 band in the recorded VUV-MATI spectrum was extrapolated to the zero-field limit, allowing the adiabatic ionization energy of THF to be accurately estimated to be 9.4256 ± 0.0004 eV. The above ionization was assigned to a transition between C-symmetric neutral (S) and cationic (D) ground states. The potential energy surfaces associated with molecular pseudorotation in the above states were constructed at the B3LYP/aug-cc-pVDZ level, being in good agreement with experimental observations. The twisted (C-symmetric) and bent (C-symmetric) conformers of the S state were predicted to be separated by a small interconversion barrier, whereas the D state exclusively existed in the C conformation. Based on the above, the peaks in the MATI spectrum were successfully assigned based on the Franck-Condon factors and vibrational frequencies calculated by varying the geometrical parameters of the C conformation, which determines the precise molecular structure of the THF cation.
单光子真空紫外光质量分析阈值电离(VUV-MATI)光谱法被用于表征四氢呋喃(THF)的基本构象,从而确定构成DNA和RNA骨架的呋喃糖环的立体化学。由于THF的VUV-MATI光谱与气相THF阳离子的振动光谱完全对应,通过在振动光谱区域扫描VUV脉冲的波长,利用具有高里德堡态目标延迟脉冲场电离功能的飞行时间质谱法检测上述阳离子。将记录的VUV-MATI光谱中0-0带的位置外推至零场极限,从而准确估计出THF的绝热电离能为9.4256±0.0004 eV。上述电离被归因于C对称中性(S)基态和阳离子(D)基态之间的跃迁。在B3LYP/aug-cc-pVDZ水平构建了与上述状态下分子假旋转相关的势能面,与实验观测结果吻合良好。预测S态的扭曲(C对称)和弯曲(C对称)构象异构体由一个小的互变势垒隔开,而D态仅以C构象存在。基于上述内容,通过改变决定THF阳离子精确分子结构的C构象的几何参数计算出的弗兰克-康登因子和振动频率,成功地对MATI光谱中的峰进行了归属。