Center for Plant Aging Research, Institute for Basic Science (IBS), Daegu, Republic of Korea.
Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology (DGIST), Daegu, Republic of Korea.
J Exp Bot. 2018 Feb 12;69(4):811-823. doi: 10.1093/jxb/erx345.
Leaf senescence is a genetically programmed process that constitutes the last stage of leaf development, and involves massive changes in gene expression. As a result of the intensive efforts that have been made to elucidate the molecular genetic mechanisms underlying leaf senescence, 184 genes that alter leaf senescence phenotypes when mutated or overexpressed have been identified in Arabidopsis thaliana over the past two decades. Concurrently, experimental evidence on functional redundancy within senescence-associated genes (SAGs) has increased. In this review, we focus on transcription factors that play regulatory roles in Arabidopsis leaf senescence, and describe the relationships among gene duplication, gene expression level, and senescence phenotypes. Previous findings and our re-analysis demonstrate the widespread existence of duplicate SAG pairs and a correlation between gene expression levels in duplicate genes and senescence-related phenotypic severity of the corresponding mutants. We also highlight effective and powerful tools that are available for functional analyses of redundant SAGs. We propose that the study of duplicate SAG pairs offers a unique opportunity to understand the regulation of leaf senescence and can guide the investigation of the functions of redundant SAGs via reverse genetic approaches.
叶片衰老(leaf senescence)是一个由基因编程的过程,它构成了叶片发育的最后阶段,并涉及到基因表达的大规模变化。由于人们为阐明拟南芥(Arabidopsis thaliana)叶片衰老的分子遗传机制做出了巨大的努力,在过去的二十年中,已经鉴定出 184 个在突变或过表达时改变叶片衰老表型的基因。同时,与衰老相关基因(SAGs)内功能冗余的实验证据也在增加。在这篇综述中,我们专注于在拟南芥叶片衰老中起调控作用的转录因子,并描述基因复制、基因表达水平和衰老表型之间的关系。以前的发现和我们的重新分析表明,重复的 SAG 对广泛存在,并且在重复基因中的基因表达水平与相应突变体的衰老相关表型严重程度之间存在相关性。我们还强调了用于冗余 SAG 功能分析的有效且强大的工具。我们提出,对重复 SAG 对的研究为理解叶片衰老的调控提供了一个独特的机会,并可以通过反向遗传学方法指导对冗余 SAG 功能的研究。