Li Hua, Liu Hongying
Shanghai Institute of Cardiovascular Diseases, Zhongshan Hospital, Fudan University, Shanghai 200032, China.
Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China.
Evid Based Complement Alternat Med. 2017;2017:5671860. doi: 10.1155/2017/5671860. Epub 2017 Nov 19.
is a traditional Chinese medicinal herb used for treating cardiovascular diseases. Depside salt from (DSSM) contains the following active components: magnesium lithospermate B, lithospermic acid, and rosmarinic acid. This study aimed to reveal the mechanisms of action of DSSM. After searching for DSSM-associated genes in GeneCards, Search Tool for Interacting Chemicals, SuperTarget, PubChem, and Comparative Toxicogenomics Database, they were subjected to enrichment analysis using Multifaceted Analysis Tool for Human Transcriptome. A protein-protein interaction (PPI) network was visualised; module analysis was conducted using the Cytoscape software. Finally, a transcriptional regulatory network was constructed using the TRRUST database and Cytoscape. Seventy-three DSSM-associated genes were identified. JUN, TNF, NFKB1, and FOS were hub nodes in the PPI network. Modules 1 and 2 were identified from the PPI network, with pathway enrichment analysis, showing that the presence of and in module 1 was indicative of a particular association with the NF-B signalling pathway. JUN, TNF, NFKB1, FOS, and BCL2 exhibited notable interactions among themselves in the PPI network. Several regulatory relationships (such as → , → and → ) were also found in the regulatory network. Thus, DSSM exerts effects against cardiovascular diseases by targeting , , , , and .
是一种用于治疗心血管疾病的传统中草药。来自[具体名称未给出]的缩酚酸肽盐(DSSM)含有以下活性成分:紫草酸镁、紫草酸和迷迭香酸。本研究旨在揭示DSSM的作用机制。在GeneCards、相互作用化学物质搜索工具、SuperTarget、PubChem和比较毒理基因组学数据库中搜索与DSSM相关的基因后,使用人类转录组多方面分析工具对它们进行富集分析。可视化了蛋白质-蛋白质相互作用(PPI)网络;使用Cytoscape软件进行模块分析。最后,使用TRRUST数据库和Cytoscape构建转录调控网络。鉴定出73个与DSSM相关的基因。JUN、TNF、NFKB1和FOS是PPI网络中的枢纽节点。从PPI网络中鉴定出模块1和模块2,通过通路富集分析表明,模块1中[具体成分未给出]和[具体成分未给出]的存在表明与NF-κB信号通路存在特定关联。JUN、TNF、NFKB1、FOS和BCL2在PPI网络中彼此之间表现出显著的相互作用。在调控网络中还发现了几种调控关系(如[具体关系未给出]→[具体关系未给出]、[具体关系未给出]→[具体关系未给出]和[具体关系未给出]→[具体关系未给出])。因此,DSSM通过靶向[具体基因未给出]、[具体基因未给出]、[具体基因未给出]、[具体基因未给出]和[具体基因未给出]对心血管疾病发挥作用。