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用于入侵性亚洲鱼类绦虫裂头绦虫的多态微卫星的开发。

Development of polymorphic microsatellites for the invasive Asian fish tapeworm Schyzocotyle acheilognathi.

作者信息

Brabec Jan, Scholz Tomáš, Štefka Jan

机构信息

Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, České Budějovice, Czech Republic.

Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, České Budějovice, Czech Republic.

出版信息

Parasitol Int. 2018 Jun;67(3):341-343. doi: 10.1016/j.parint.2018.01.007. Epub 2018 Feb 2.

Abstract

We describe the development of ready-to-use set of fifteen polymorphic microsatellite markers to benefit future population biology and phylogeographic studies on the invasive Asian fish tapeworm Schyzocotyle acheilognathi. The microsatellite loci were selected from partial Illumina shotgun genome sequences of three parasite specimens and their universality tested on a set of 12 geographically distant populations of the parasite. Particularly low levels of heterozygosity have been detected in the Chinese population pointing towards possible hidden population structure that deserves further attention in future population genetic studies.

摘要

我们描述了一套现成的15个多态性微卫星标记的开发情况,以利于未来对入侵性亚洲鱼类绦虫——亚洲槽绦虫(Schyzocotyle acheilognathi)开展种群生物学和系统地理学研究。微卫星位点是从三个寄生虫标本的部分Illumina鸟枪法基因组序列中选取的,并在一组来自12个地理距离较远的该寄生虫种群中测试了其通用性。在中国种群中检测到特别低的杂合度水平,这表明可能存在隐藏的种群结构,值得在未来的种群遗传学研究中进一步关注。

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