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有害甲藻(Ostreopsis cf. ovata)生长过程中的微生物动态:细菌演替和病毒丰度模式。

Microbial dynamics during harmful dinoflagellate Ostreopsis cf. ovata growth: Bacterial succession and viral abundance pattern.

机构信息

Department of Biological, Geological and Environmental Sciences (BiGeA), University of Bologna, Ravenna, Italy.

Department of Chemical, Biological, Pharmaceutical and Environmental Sciences (ChiBioFarAm), University of Messina, Messina, Italy.

出版信息

Microbiologyopen. 2018 Aug;7(4):e00584. doi: 10.1002/mbo3.584. Epub 2018 Feb 27.

Abstract

Algal-bacterial interactions play a major role in shaping diversity of algal associated bacterial communities. Temporal variation in bacterial phylogenetic composition reflects changes of these complex interactions which occur during the algal growth cycle as well as throughout the lifetime of algal blooms. Viruses are also known to cause shifts in bacterial community diversity which could affect algal bloom phases. This study investigated on changes of bacterial and viral abundances, bacterial physiological status, and on bacterial successional pattern associated with the harmful benthic dinoflagellate Ostreopsis cf. ovata in batch cultures over the algal growth cycle. Bacterial community phylogenetic structure was assessed by 16S rRNA gene ION torrent sequencing. A comparison between bacterial community retrieved in cultures and that one co-occurring in situ during the development of the O. cf. ovata bloom from where the algal strain was isolated was also reported. Bacterial community growth was characterized by a biphasic pattern with the highest contributions (~60%) of highly active bacteria found at the two bacterial exponential growth steps. An alphaproteobacterial consortium composed by the Rhodobacteraceae Dinoroseobacter (22.2%-35.4%) and Roseovarius (5.7%-18.3%), together with Oceanicaulis (14.2-40.3%), was strongly associated with O. cf. ovata over the algal growth. The Rhodobacteraceae members encompassed phylotypes with an assessed mutualistic-pathogenic bimodal behavior. Fabibacter (0.7%-25.2%), Labrenzia (5.6%-24.3%), and Dietzia (0.04%-1.7%) were relevant at the stationary phase. Overall, the successional pattern and the metabolic and functional traits of the bacterial community retrieved in culture mirror those ones underpinning O. cf. ovata bloom dynamics in field. Viral abundances increased synoptically with bacterial abundances during the first bacterial exponential growth step while being stationary during the second step. Microbial trends also suggest that viruses induced some shifts in bacterial community composition.

摘要

藻菌相互作用在塑造藻类相关细菌群落的多样性方面起着重要作用。细菌系统发育组成的时间变化反映了这些复杂相互作用的变化,这些变化发生在藻类生长周期内以及藻类水华的整个生命周期中。病毒也会导致细菌群落多样性的变化,从而影响藻类水华阶段。本研究调查了有害底栖甲藻 cf. ovata 在藻类生长周期的分批培养中,细菌和病毒丰度、细菌生理状态以及与细菌演替模式的变化,以及与细菌演替模式的变化。通过 16S rRNA 基因 ION torrent 测序评估细菌群落的系统发育结构。还报告了在培养物中回收的细菌群落与从分离藻株的 O. cf. ovata 水华发展过程中同时存在的原位细菌群落之间的比较。细菌群落的生长特征为双相模式,在两个细菌指数生长阶段发现的高活性细菌贡献最高(~60%)。一个由 Rhodobacteraceae 的 Dinoroseobacter(22.2%-35.4%)和 Roseovarius(5.7%-18.3%)以及 Oceanicaulis(14.2-40.3%)组成的α变形菌 consortium与 O. cf. ovata 密切相关藻类生长。Rhodobacteraceae 成员包含具有评估的共生-致病双峰行为的类群。Fabibacter(0.7%-25.2%)、Labrenzia(5.6%-24.3%)和 Dietzia(0.04%-1.7%)在静止期很重要。总的来说,培养中回收的细菌群落的演替模式以及代谢和功能特征反映了现场 cf. ovata 水华动态的那些特征。病毒丰度与第一细菌指数生长阶段的细菌丰度同步增加,而在第二阶段则保持静止。微生物趋势还表明,病毒诱导了细菌群落组成的一些变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/26ee/6079179/5d6805e93e00/MBO3-7-e00584-g001.jpg

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