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关于无处不在的内生菌、植物和人类病原体的系统发育重新评估

Phylogenetic reassessment of : Ubiquitous endophytes, plant and human pathogens.

作者信息

Wang M, Liu F, Crous P W, Cai L

机构信息

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.

College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, PR China.

出版信息

Persoonia. 2017 Dec;39:118-142. doi: 10.3767/persoonia.2017.39.06. Epub 2017 Jul 7.

Abstract

Species of commonly occur as plant pathogens, endophytes or saprobes, and have been shown to be extremely interesting for the discovery of novel metabolites. The familial placement, as well as phylogenetic relationships among species remain ambiguous. In this study, (= ) is confirmed as a monophyletic genus belonging to (), based on a phylogeny inferred from LSU sequence data. A multi-locus phylogeny based on ITS, and , in conjunction with morphological characters, host associations, and ecological data was employed for species delimitation in , as well as identification of 165 recently collected isolates from China, and three from Europe. In total 13 novelties are proposed including 12 new species and 1 new combination. Five species are re-described based on an examination of type specimens and/or fresh collections. New species described in this paper include: , , , , , , , , , , and . Furthermore, is transferred to Our results indicate a high level of species diversity within , with a general lack in host specificity. Taxa that cluster basal in have wide host ranges, whereas those that diverged later tend to have narrow host ranges. The currently available data suggest, therefore, that the general evolutionary direction in the genus is from a wide to a narrow host range.

摘要

该属物种通常作为植物病原体、内生菌或腐生菌出现,并且已被证明在发现新型代谢产物方面极具吸引力。该属的分类位置以及种间的系统发育关系仍不明确。在本研究中,基于从 LSU 序列数据推断的系统发育,确认了(= )为属于()的单系属。基于 ITS、 和 的多位点系统发育,结合形态特征、寄主关联和生态数据,用于该属的物种界定,以及对最近从中国收集的 165 个分离株和来自欧洲的 3 个分离株进行鉴定。总共提出了 13 个新分类单元,包括 12 个新物种和 1 个新组合。基于对模式标本和/或新鲜标本的检查,重新描述了 5 个物种。本文描述的新物种包括: 、 、 、 、 、 、 、 、 、 、 和 。此外, 将 转移到 。我们的结果表明该属内物种多样性水平较高,总体上缺乏寄主特异性。在该属基部聚类的分类单元具有广泛的寄主范围,而那些后来分化的分类单元往往具有狭窄的寄主范围。因此,目前可用的数据表明,该属的一般进化方向是从广泛的寄主范围到狭窄的寄主范围。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1497/5832950/417dadb8d599/per-39-118-g001a.jpg

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