Institute of Biochemistry and Molecular Medicine, and Swiss National Centre of Competence in Research (NCCR) TransCure, University of Bern, CH-3012 Bern, Switzerland.
Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Int J Mol Sci. 2018 Mar 20;19(3):918. doi: 10.3390/ijms19030918.
The l-arginine/agmatine transporter AdiC is a prokaryotic member of the SLC7 family, which enables pathogenic enterobacteria to survive the extremely acidic gastric environment. Wild-type AdiC from as well as its previously reported point mutants N22A and S26A, were overexpressed homologously and purified to homogeneity. A size-exclusion chromatography-based thermostability assay was used to determine the melting temperatures (s) of the purified AdiC variants in the absence and presence of the selected ligands l-arginine (Arg), agmatine, l-arginine methyl ester, and l-arginine amide. The resulting s indicated stabilization of AdiC variants upon ligand binding, in which s and ligand binding affinities correlated positively. Considering results from this and previous studies, we revisited the role of AdiC residue S26 in Arg binding and proposed interactions of the α-carboxylate group of Arg exclusively with amide groups of the AdiC backbone. In the context of substrate binding in the human SLC7 family member l-type amino acid transporter-1 (LAT1; SLC7A5), an analogous role of S66 in LAT1 to S26 in AdiC is discussed based on homology modeling and amino acid sequence analysis. Finally, we propose a binding mechanism for l-amino acid substrates to LATs from the SLC7 family.
精氨酸/胍丁胺转运蛋白 AdiC 是 SLC7 家族的原核成员,使致病性肠杆菌能够在极其酸性的胃环境中存活。野生型来自以及之前报道的点突变 N22A 和 S26A 的 AdiC 被同源过表达并纯化为均相。基于排阻层析的热稳定性测定法用于确定纯化的 AdiC 变体在不存在和存在选定配体 l-精氨酸(Arg)、胍丁胺、l-精氨酸甲酯和 l-精氨酸酰胺的情况下的熔点(s)。结果表明,配体结合稳定了 AdiC 变体,s 值与配体结合亲和力呈正相关。考虑到本研究和以前研究的结果,我们重新审视了 AdiC 残基 S26 在 Arg 结合中的作用,并提出 Arg 的α-羧酸盐基团与 AdiC 骨架的酰胺基团的相互作用。在人类 SLC7 家族成员 L 型氨基酸转运蛋白 1(LAT1;SLC7A5)的底物结合背景下,基于同源建模和氨基酸序列分析,讨论了 AdiC 中 S26 对 LAT1 中 S66 的类似作用。最后,我们提出了 SLC7 家族的 LAT 对 l-氨基酸底物的结合机制。