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用扩展的双砷小分子库对工程蛋白酪氨酸磷酸酶进行优化的别构抑制。

Optimized allosteric inhibition of engineered protein tyrosine phosphatases with an expanded palette of biarsenical small molecules.

机构信息

Amherst College, Department of Chemistry, Amherst, MA 01002, USA.

Department of Chemical Biology, Faculty of Biotechnology, University of Wrocław, F. Joliot-Curie 14a, 50-383 Wrocław, Poland.

出版信息

Bioorg Med Chem. 2018 May 15;26(9):2610-2620. doi: 10.1016/j.bmc.2018.04.026. Epub 2018 Apr 12.

Abstract

Protein tyrosine phosphatases (PTPs), which catalyze the dephosphorylation of phosphotyrosine in protein substrates, are important cell-signaling regulators, as well as potential drug targets for a range of human diseases. Chemical tools for selectively targeting the activities of individual PTPs would help to elucidate PTP signaling roles and potentially expedite the validation of PTPs as therapeutic targets. We have recently reported a novel strategy for the design of non-natural allosteric-inhibition sites in PTPs, in which a tricysteine moiety is engineered within the PTP catalytic domain at a conserved location outside of the active site. Introduction of the tricysteine motif, which does not exist in any wild-type PTP, serves to sensitize target PTPs to inhibition by a biarsenical compound, providing a generalizable strategy for the generation of allosterically sensitized (as) PTPs. Here we show that the potency, selectivity, and kinetics of asPTP inhibition can be significantly improved by exploring the inhibitory action of a range of biarsenical compounds that differ in interarsenical distance, steric bulk, and electronic structure. By investigating the inhibitor sensitivities of five asPTPs from four different subfamilies, we have found that asPTP catalytic domains can be broadly divided into two groups: one that is most potently inhibited by biarsenical compounds with large interarsenical distances, such as AsCy3-EDT, and one that is most potently inhibited by compounds with relatively small interarsenical distances, such as FlAsH-EDT. Moreover, we show that a tetrachlorinated derivative of FlAsH-EDT, Cl4FlAsH-EDT, targets asPTPs significantly more potently than the parent compound, both in vitro and in asPTP-expressing cells. Our results show that biarsenicals with altered interarsenical distances and electronic properties are important tools for optimizing the control of asPTP activity and, more broadly, suggest that diversification of biarsenical libraries can serve to increase the efficacy of these compounds in targeted control of protein function.

摘要

蛋白质酪氨酸磷酸酶(PTPs)能够催化蛋白质底物中磷酸酪氨酸的去磷酸化,是重要的细胞信号调节因子,也是一系列人类疾病潜在的药物靶点。用于选择性靶向单个 PTP 活性的化学工具将有助于阐明 PTP 信号作用,并有可能加速 PTP 作为治疗靶点的验证。我们最近报道了一种设计 PTP 中非天然别构抑制位点的新策略,其中在远离活性位点的保守位置的 PTP 催化结构域内工程化三半胱氨酸部分。引入三半胱氨酸基序,该基序不存在于任何野生型 PTP 中,使靶 PTP 对双砷化合物的抑制敏感,为产生别构敏感(as)PTP 提供了一种可推广的策略。这里我们表明,通过探索一系列在砷间距离、空间位阻和电子结构上不同的双砷化合物的抑制作用,可以显著提高 asPTP 抑制的效力、选择性和动力学。通过研究来自四个不同亚家族的五个 asPTP 的抑制剂敏感性,我们发现 asPTP 催化结构域可以大致分为两类:一类最有效地被具有大砷间距离的双砷化合物如 AsCy3-EDT 抑制,另一类最有效地被具有相对较小砷间距离的化合物如 FlAsH-EDT 抑制。此外,我们表明 FlAsH-EDT 的四氯化衍生物 Cl4FlAsH-EDT 在体外和表达 asPTP 的细胞中都比母体化合物更有效地靶向 asPTP。我们的结果表明,改变砷间距离和电子性质的双砷化合物是优化 asPTP 活性控制的重要工具,更广泛地说,表明多样化的双砷化合物库可以提高这些化合物在靶向控制蛋白质功能方面的功效。

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