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草鱼(Ctenopharyngodon idella)素食适应过程中 T1R1 基因的 DNA 甲基化。

DNA Methylation of T1R1 Gene in the Vegetarian Adaptation of Grass Carp Ctenopharyngodon idella.

机构信息

College of Fisheries, Chinese Perch Research Center, Huazhong Agricultural University, Wuhan, 430070, China.

Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Wuhan, 430070, China.

出版信息

Sci Rep. 2018 May 2;8(1):6934. doi: 10.1038/s41598-018-25121-4.

Abstract

Although previous studies have indicated importance of taste receptors in food habits formation in mammals, little is known about those in fish. Grass carp is an excellent model for studying vegetarian adaptation, as it shows food habit transition from carnivore to herbivore. In the present study, pseudogenization or frameshift mutations of the umami receptors that hypothesized related to dietary switch in vertebrates, were not found in grass carp, suggesting other mechanisms for vegetarian adaptation in grass carp. T1R1 and T1R3 strongly responded to L-Arg and L-Lys, differing from those of zebrafish and medaka, contributing to high species specificity in amino acid preferences and diet selection of grass carp. After food habit transition of grass carp, DNA methylation levels were higher in CPG1 and CPG3 islands of upstream control region of T1R1 gene. Luciferase activity assay of upstream regulatory region of T1R1 (-2500-0 bp) without CPG1 or CPG3 indicated that CPG1 and CPG3 might be involved in transcriptional regulation of T1R1 gene. Subsequently, high DNA methylation decreased expression of T1R1 in intestinal tract. It could be a new mechanism to explain, at least partially, the vegetarian adaptation of grass carp by regulation of expression of umami receptor via epigenetic modification.

摘要

虽然先前的研究表明味觉受体在哺乳动物的饮食习惯形成中很重要,但对于鱼类中的味觉受体知之甚少。草鱼是研究草食性适应的理想模型,因为它表现出从肉食性到草食性的饮食习惯转变。在本研究中,鲜味受体的假基因化或移码突变,这些突变被假设与脊椎动物的饮食转变有关,在草鱼中并未发现,这表明草鱼的草食性适应可能存在其他机制。T1R1 和 T1R3 对 L-Arg 和 L-Lys 的反应强烈,与斑马鱼和青鳉不同,这有助于草鱼在氨基酸偏好和饮食选择上具有高度的种特异性。在草鱼饮食习惯转变后,T1R1 基因上游调控区的 CPG1 和 CPG3 岛的 DNA 甲基化水平升高。没有 CPG1 或 CPG3 的 T1R1 上游调控区的荧光素酶活性测定表明,CPG1 和 CPG3 可能参与 T1R1 基因的转录调控。随后,高 DNA 甲基化降低了肠道中 T1R1 的表达。这可能是一种新的机制,通过表观遗传修饰来调节鲜味受体的表达,从而至少部分解释了草鱼的草食性适应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec43/5931979/875bbed00364/41598_2018_25121_Fig1_HTML.jpg

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