• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

细胞色素c'中的晶格迁移率和反常温度因子行为

Lattice mobility and anomalous temperature factor behaviour in cytochrome c'.

作者信息

Finzel B C, Salemme F R

出版信息

Nature. 1985;315(6021):686-8. doi: 10.1038/315686a0.

DOI:10.1038/315686a0
PMID:2989701
Abstract

Atomic temperature factors (B-values) obtained from X-ray refinement experiments provide empirical estimates of protein mobility that have been correlated with both theoretical simulations of protein dynamics and experimental studies of antibody reactivity. The comparison of B-values with protein solution properties requires adjustment of the apparent atomic mobilities to compensate for the effects of the crystal environment. Here we compare crystallographically independent subunits of the dimeric cytochrome c' from the bacterium Rhodospirillum molischianum to examine how lattice effects influence refined B-values. In addition to local effects on protein mobility at crystal contacts, we show that B-value differences up to 12 A between subunits result from lattice disordering effects that approximate to concerted rotations of the molecules about a crystal symmetry axis.

摘要

通过X射线精修实验获得的原子温度因子(B值)提供了蛋白质流动性的经验估计值,这些估计值已与蛋白质动力学的理论模拟以及抗体反应性的实验研究相关联。将B值与蛋白质溶液性质进行比较时,需要调整表观原子迁移率,以补偿晶体环境的影响。在此,我们比较了来自球形红假单胞菌的二聚体细胞色素c'的晶体学独立亚基,以研究晶格效应如何影响精修后的B值。除了对晶体接触处蛋白质流动性的局部影响外,我们还表明,亚基之间高达12 Å的B值差异是由晶格无序效应导致的,这种效应近似于分子围绕晶体对称轴的协同旋转。

相似文献

1
Lattice mobility and anomalous temperature factor behaviour in cytochrome c'.细胞色素c'中的晶格迁移率和反常温度因子行为
Nature. 1985;315(6021):686-8. doi: 10.1038/315686a0.
2
Structure of ferricytochrome c' from Rhodospirillum molischianum at 1.67 A resolution.嗜糖红螺菌中细胞色素c'铁蛋白在1.67埃分辨率下的结构。
J Mol Biol. 1985 Dec 5;186(3):627-43. doi: 10.1016/0022-2836(85)90135-4.
3
Extended X-ray absorption fine structure study of Rhodospirillum rubrum and Rhodospirillum molischianum cytochromes c': relationship between heme stereochemistry and spin state.深红红螺菌和莫氏红螺菌细胞色素c'的扩展X射线吸收精细结构研究:血红素立体化学与自旋态之间的关系
Biochemistry. 1989 Feb 21;28(4):1513-7. doi: 10.1021/bi00430a014.
4
Steric and hydrophobic effects in alkyl isocyanide binding to Rhodospirillum molischianum cytochrome c'.
Biochemistry. 1989 Mar 7;28(5):2140-4. doi: 10.1021/bi00431a027.
5
High-resolution crystal structures of two polymorphs of cytochrome c' from the purple phototrophic bacterium rhodobacter capsulatus.来自紫色光合细菌荚膜红细菌的细胞色素c'两种多晶型物的高分辨率晶体结构。
J Mol Biol. 1996 Jun 14;259(3):467-79. doi: 10.1006/jmbi.1996.0333.
6
Correlations between structural and spectroscopic properties of the high-spin heme protein cytochrome c'.
Biochemistry. 1982 Oct 12;21(21):5116-9. doi: 10.1021/bi00264a001.
7
Basis for monomer stabilization in Rhodopseudomonas palustris cytochrome c' derived from the crystal structure.基于沼泽红假单胞菌细胞色素c'晶体结构的单体稳定化基础。
J Mol Biol. 1998 Dec 4;284(3):751-60. doi: 10.1006/jmbi.1998.2190.
8
Carbon monoxide binding to Rhodospirillum molischianum ferrocytochrome c'.一氧化碳与嗜糖红螺菌亚铁细胞色素c'的结合
Biochemistry. 1985 Apr 9;24(8):1987-91. doi: 10.1021/bi00329a028.
9
Structure of ferricytochrome c' from Rhodospirillum rubrum at 6 A resolution.红螺菌中细胞色素c'铁蛋白在6埃分辨率下的结构
J Biochem. 1985 Jul;98(1):77-80. doi: 10.1093/oxfordjournals.jbchem.a135275.
10
Kinetics of electron transfer between cytochromes c' and the semiquinones of free flavin and clostridial flavodoxin.
Biochemistry. 1986 Mar 25;25(6):1383-90. doi: 10.1021/bi00354a029.

引用本文的文献

1
Anomalous temperature factor behavior and crystal lattice mobility in cytochrome C'.细胞色素C'中异常的温度因子行为和晶格迁移率
Biophys J. 1986 Jan;49(1):73-6. doi: 10.1016/S0006-3495(86)83598-6.
2
Response of dynamic structure to removal of a disulfide bond: normal mode refinement of C77A/C95A mutant of human lysozyme.动态结构对二硫键去除的响应:人溶菌酶C77A/C95A突变体的正常模式优化
Protein Sci. 1994 Jan;3(1):92-102. doi: 10.1002/pro.5560030112.
3
The 2-A resolution structure of a thermostable ribonuclease A chemically cross-linked between lysine residues 7 and 41.
一种在赖氨酸残基7和41之间进行化学交联的热稳定核糖核酸酶A的2-A分辨率结构。
Proc Natl Acad Sci U S A. 1985 Dec;82(24):8473-7. doi: 10.1073/pnas.82.24.8473.
4
Accurate simulation of protein dynamics in solution.溶液中蛋白质动力学的精确模拟。
Proc Natl Acad Sci U S A. 1988 Oct;85(20):7557-61. doi: 10.1073/pnas.85.20.7557.
5
Antigenic determinants in proteins coincide with surface regions accessible to large probes (antibody domains).蛋白质中的抗原决定簇与大探针(抗体结构域)可及的表面区域一致。
Proc Natl Acad Sci U S A. 1986 Jan;83(2):226-30. doi: 10.1073/pnas.83.2.226.