Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, 60438 Frankfurt am Main, Germany.
National Laboratory of Biomacromolecules, CAS Center for Excellence in Macromoleculers, Institute of Biophysics, Chinese Academy of Sciences, 100101 Beijing, China; School of Medicine, Tsinghua University, 100084 Beijing, China.
Biochim Biophys Acta Gen Subj. 2018 Dec;1862(12):2797-2805. doi: 10.1016/j.bbagen.2018.08.017. Epub 2018 Aug 24.
Peroxiredoxins (Prxs) are thiol peroxidases that scavenge various peroxide substrates such as hydrogen peroxide (HO), alkyl hydroperoxides and peroxinitrite. They also function as chaperones and are involved in signal transduction by HO in eukaryotic cells. The genome of Aquifex aeolicus, a microaerophilic, hyperthermophilic eubacterium, encodes four Prxs, among them an alkyl hydroperoxide reductase AhpC2 which was found to be closely related to archaeal 1-Cys peroxiredoxins. We determined the crystal structure of AhpC2 at 1.8 Å resolution and investigated its oligomeric state in solution by electron microscopy. AhpC2 is arranged as a toroid-shaped dodecamer instead of the typically observed decamer. The basic folding topology and the active site structure are conserved and possess a high structural similarity to other 1-Cys Prxs. However, the C-terminal region adopts an opposite orientation. AhpC2 contains three cysteines, Cys, Cys, and Cys. The peroxidatic cysteine C was found to be hyperoxidized to the sulfonic acid (SOH) form, while Cys forms an intra-monomer disulfide bond with Cys. Mutagenesis experiments indicate that Cys and Cys play important roles in the oligomerization of AhpC2. Based on these structural characteristics, we proposed the catalytic mechanism of AhpC2. This study provides novel insights into the structure and reaction mechanism of 1-Cys peroxiredoxins.
过氧化物酶(Prxs)是一类巯基过氧化物酶,可以清除各种过氧化物底物,如过氧化氢(HO)、烷基过氧化物和过亚硝酸盐。它们还作为伴侣蛋白发挥作用,并参与真核细胞中 HO 的信号转导。微需氧、嗜热的古生菌 Aquifex aeolicus 的基因组编码了四种 Prxs,其中一种烷基过氧化物还原酶 AhpC2 与古菌 1-Cys 过氧化物酶密切相关。我们测定了 AhpC2 的晶体结构,分辨率为 1.8Å,并通过电子显微镜研究了其在溶液中的寡聚状态。AhpC2 呈环形十二聚体排列,而不是通常观察到的十聚体。基本折叠拓扑结构和活性位点结构是保守的,与其他 1-Cys Prxs 具有高度的结构相似性。然而,C 末端区域的取向相反。AhpC2 包含三个半胱氨酸残基 Cys、Cys 和 Cys。过氧化物酶活性中心的半胱氨酸 C 被氧化为磺酸(SOH)形式,而 Cys 与 Cys 形成单体内部二硫键。突变实验表明 Cys 和 Cys 对 AhpC2 的寡聚化起着重要作用。基于这些结构特征,我们提出了 AhpC2 的催化机制。本研究为 1-Cys 过氧化物酶的结构和反应机制提供了新的见解。