Amberkar Ujwala, Khandeparker Rakhee, Parab Pankaj
National Institute of Oceanography, Biological Oceanography Division, Microbial Ecology Lab, CSIR, Dona Paula, Goa, 403004, India.
Curr Microbiol. 2019 Jan;76(1):63-69. doi: 10.1007/s00284-018-1585-y. Epub 2018 Oct 19.
This study analyses the induction and repression of nitrate reduction activity in a batch culture of Idiomarina strain cos21. On a change from aerobic to anaerobic respiration, the culture entered a stationary phase. The onset of this phase showed 3.75 fold increase in mRNA levels for the nitrate reductase enzyme. mRNA accumulated very rapidly during a short period, after which its overall concentration declined to reach a lower value. The level of nitrite reductase protein reached a maximum value at 36 h of growth when the oxygen concentration dropped below 10 µM. The data set provided here confer new insights into the understanding of the physiological response of Idiomarina strain cos21 to change in oxygen concentration allowing the bacterium to survive and adapt to a new environment by dissimilatory reduction of nitrate to nitrite, which serves to provide energy as the bacteria adapt to anaerobiosis. Main strategy used here is to induce, measure, and track the expression of microbial genes, while they grow in culture conditions to better mimic interaction in a natural environment. This study will help us with a better understanding of the nitrate reduction process in the oxygen minimum zone.
本研究分析了嗜海菌属菌株cos21分批培养过程中硝酸盐还原活性的诱导和抑制情况。从有氧呼吸转变为无氧呼吸时,培养物进入稳定期。此阶段开始时,硝酸还原酶的mRNA水平增加了3.75倍。mRNA在短时间内迅速积累,之后其总体浓度下降至较低值。当氧气浓度降至10µM以下时,亚硝酸还原酶蛋白水平在生长36小时时达到最大值。此处提供的数据集为理解嗜海菌属菌株cos21对氧气浓度变化的生理反应提供了新的见解,使该细菌能够通过将硝酸盐异化还原为亚硝酸盐来生存并适应新环境,在细菌适应厌氧状态时,亚硝酸盐可作为能量来源。这里使用的主要策略是在微生物在培养条件下生长时诱导、测量和追踪其基因表达,以便更好地模拟自然环境中的相互作用。本研究将有助于我们更好地理解海洋低氧区的硝酸盐还原过程。