Santi Simonetta
Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, Udine, Italy.
Methods Mol Biol. 2019;1875:279-290. doi: 10.1007/978-1-4939-8837-2_20.
Phytoplasmas have been found confined mainly in leaf phloem sieve elements. In spite of this, few researches have been focused on the infected phloem tissue, whereas the plant response at the infection site could be quite different compared to distal parts and almost completely masked when whole organs are considered. Herein, we provide a protocol for the isolation of leaf phloem from paraffin-embedded samples by Laser Microdissection, followed by RNA purification and RNA amplification to generate cDNA libraries. Our protocol, which has been set up for phytoplasma-infected field-grown grapevine and successfully used for gene expression profiling, can be modified according to different plant species.
植原体主要局限于叶片韧皮部筛管分子中。尽管如此,很少有研究聚焦于受感染的韧皮部组织,而感染部位的植物反应可能与远端部分有很大不同,当考虑整个器官时,这种差异几乎会被完全掩盖。在此,我们提供了一种通过激光显微切割从石蜡包埋样本中分离叶片韧皮部的方法,随后进行RNA纯化和RNA扩增以生成cDNA文库。我们的方法是针对感染植原体的田间种植葡萄建立的,并已成功用于基因表达谱分析,可根据不同植物物种进行修改。