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西门塔尔牛和中国本土牛垂体转录组的深入表征

In-depth characterization of the pituitary transcriptome in Simmental and Chinese native cattle.

作者信息

Li Mingxun, Lu Xubin, Xia Hailei, Zhang Chenglong, Wang Xiaolong, Chen Zhi, Zhang Huimin, Qu Kaixing, Huang Bizhi, Moore Stephen, Mao Yongjiang, Yang Zhangping

机构信息

Key Laboratory of Animal Genetics, Breeding and Molecular Design of Jiangsu province, Yangzhou University, Yangzhou 225002, China; Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, Yangzhou University, Yangzhou 225002, China.

Yunnan Academy of Grassland and Animal Science, Kunming, Yunnan 650212, China.

出版信息

Domest Anim Endocrinol. 2019 Jan;66:35-42. doi: 10.1016/j.domaniend.2018.09.003. Epub 2018 Sep 26.

Abstract

The pituitary gland is a key endocrine organ responsible for growth and development. To get closer to understanding important molecular mechanisms at work in the bovine pituitary and identifying the core genes controlling growth, in the present study we have analyzed the transcriptome profiling of the pituitary glands of two cattle breeds (Wenshan and Simmental cattle) with extreme growth differences using high-throughput RNA sequencing. Our study revealed that the overall gene expression levels are quite similar between the two breeds. A total of 18,065 annotated genes were identified, which accounted for 85% of the annotated genes in cattle. The five most abundant hormone genes (GH, PRL, POMC, CGA, and LHB) were relatively stable in both breeds, indicating their pivotal roles in maintaining the basic functions of the pituitary. In addition, 105 genes were identified as differentially expressed between Wenshan and Simmental pituitary glands, including 83 known and 22 novel genes. Functional association analyses of the differentially expressed genes between the breeds revealed 60 enriched gene ontology terms and 3 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. Interestingly, the most enriched KEGG pathway, cell adhesion molecules, can modulate pituitary hormone secretion by cell-cell contact. Our findings demonstrated that SYTL2, SLC38A4, and NCAM2 are new candidates for crucial functions in the secretory pathways of the pituitary gland. These results will further understanding of the important molecular mechanisms at work in the bovine pituitary.

摘要

垂体是负责生长和发育的关键内分泌器官。为了更深入地了解牛垂体中起作用的重要分子机制,并确定控制生长的核心基因,在本研究中,我们使用高通量RNA测序分析了两个生长差异极大的牛品种(文山牛和西门塔尔牛)垂体的转录组图谱。我们的研究表明,两个品种之间的整体基因表达水平非常相似。共鉴定出18,065个注释基因,占牛注释基因的85%。五个最丰富的激素基因(生长激素、催乳素、促黑素、绒毛膜促性腺激素α和促黄体激素β)在两个品种中相对稳定,表明它们在维持垂体基本功能方面的关键作用。此外,在文山牛和西门塔尔牛的垂体之间鉴定出105个差异表达基因,包括83个已知基因和22个新基因。对品种间差异表达基因的功能关联分析揭示了60个富集的基因本体术语和3条京都基因与基因组百科全书(KEGG)途径。有趣的是,最富集的KEGG途径,细胞粘附分子,可以通过细胞间接触调节垂体激素分泌。我们的研究结果表明,SYTL2、SLC38A4和NCAM2是垂体分泌途径中关键功能的新候选基因。这些结果将进一步加深对牛垂体中重要分子机制的理解。

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