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大规模移民对沙特阿拉伯西部地区分离的临床金黄色葡萄球菌菌株的克隆变异的影响。

Impact of mass migrations on the clonal variation of clinical Staphylococcus aureus strains isolated from the Western region of Saudi Arabia.

机构信息

Medical Laboratory Technology Department, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah, Saudi Arabia; Special Infectious Agents Unit-Biosafety Level-3, King Fahad Medical Research Centre, King Abdulaziz University, Jeddah, Saudi Arabia.

Medical Laboratory Technology Department, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah, Saudi Arabia; Special Infectious Agents Unit-Biosafety Level-3, King Fahad Medical Research Centre, King Abdulaziz University, Jeddah, Saudi Arabia.

出版信息

J Infect Public Health. 2019 May-Jun;12(3):317-322. doi: 10.1016/j.jiph.2018.11.001. Epub 2018 Nov 23.

Abstract

OBJECTIVES

A rapid molecular typing system was used to determine the impact of mass migration on the clonal variation of Staphylococcus aureus isolates recovered from King Abdulaziz University Hospital (KAUH) Jeddah, in the western region of Saudi Arabia. This region experiences an annual influx of millions of pilgrims.

METHODS

SmaI-multiplex PCR typing (SMT) was used for the initial analysis of strains and the resulting data subsequently supported by Multi-Locus Sequence Typing (MLST).

RESULTS

A total of 89 S. aureus isolates were SMT typed and revealed a high degree of genetic variation, with 40 SMT profiles detected among the isolates. Representatives of all forty SMT types were subsequently analysed by MLST, identifying 26 sequence types. A novel sequence type (ST), named ST3303, was identified in two methicillin-sensitive S. aureus (MSSA) isolates. MSSA strains exhibited more diversity than methicillin-resistant S. aureus (MRSA) strains, with community acquired MSSA and MRSA strains reaching alarmingly high levels.

CONCLUSION

The relatively high degree of genetic diversity found among S. aureus isolates of single hospital was attributed to the fact that Jeddah is the principal gateway to Mecca, visited each year by millions of pilgrims from many countries. The observed diversity clearly reflects the impact of such mass migrations in the rapid dissemination of strains world-wide. Our findings suggest the importance of surveillance programmes in locations affected by mass migrations, both to monitor their impact on endemic strains and for the detection of pandemic strains. SMT provides a cost-effective and sensitive typing method for achieving this objective.

摘要

目的

使用快速分子分型系统来确定大规模移民对沙特阿拉伯西部吉达阿卜杜勒阿齐兹大学医院(KAUH)分离的金黄色葡萄球菌克隆变异的影响。该地区每年都会涌入数以百万计的朝圣者。

方法

SmaI 多重 PCR 分型(SMT)用于对菌株进行初步分析,随后的数据得到多位点序列分型(MLST)的支持。

结果

共对 89 株金黄色葡萄球菌进行了 SMT 分型,发现其具有高度的遗传变异性,在分离株中检测到 40 种 SMT 图谱。随后对所有 40 种 SMT 型别的代表进行 MLST 分析,鉴定出 26 种序列型。在 2 株甲氧西林敏感金黄色葡萄球菌(MSSA)分离株中发现了一种新的序列型(ST),命名为 ST3303。MSSA 菌株比耐甲氧西林金黄色葡萄球菌(MRSA)菌株表现出更高的多样性,社区获得性 MSSA 和 MRSA 菌株的数量达到了惊人的水平。

结论

单个医院的金黄色葡萄球菌分离株中发现的相对较高程度的遗传多样性归因于这样一个事实,即吉达是麦加的主要门户,每年都有来自许多国家的数百万朝圣者前往那里。所观察到的多样性清楚地反映了这种大规模移民对菌株在全球范围内快速传播的影响。我们的研究结果表明,在受大规模移民影响的地区,监测计划的重要性,既要监测其对地方性菌株的影响,也要监测大流行菌株的检测。SMT 提供了一种具有成本效益和敏感的分型方法,可实现这一目标。

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