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H3和H4组蛋白的纯化以及细胞和脑组织中乙酰化组蛋白标记的定量分析。

Purification of H3 and H4 Histone Proteins and the Quantification of Acetylated Histone Marks in Cells and Brain Tissue.

作者信息

Janczura Karolina J, Volmar Claude-Henry, Wahlestedt Claes

机构信息

Department of Psychiatry & Behavioral Sciences, University of Miami Miller School of Medicine; Center for Therapeutic Innovation, University of Miami Miller School of Medicine.

Department of Psychiatry & Behavioral Sciences, University of Miami Miller School of Medicine; Center for Therapeutic Innovation, University of Miami Miller School of Medicine;

出版信息

J Vis Exp. 2018 Nov 30(141). doi: 10.3791/58648.

Abstract

In all eukaryotic organisms, chromatin, the physiological template of all genetic information, is essential for heredity. Chromatin is subject to an array of diverse posttranslational modifications (PTMs) that mostly occur in the amino termini of histone proteins (i.e., histone tail) and regulate the accessibility and functional state of the underlying DNA. Histone tails extend from the core of the nucleosome and are subject to the addition of acetyl groups by histone acetyltransferases (HATs) and the removal of acetyl groups by histone deacetylases (HDACs) during cellular growth and differentiation. Specific acetylation patterns on lysine (K) residues on histone tails determine a dynamic homeostasis between transcriptionally active or transcriptionally repressed chromatin by (1) influencing the core histone assembly and (2) recruiting synergistic or antagonistic chromatin-associated proteins to the transcription site. The fundamental regulatory mechanism of the complex nature of histone tail PTMs influences the majority of chromatin-templated processes and results in changes in cell maturation and differentiation in both normal and pathological development. The goal of the current report is to provide novices with an efficient method to purify core histone proteins from cells and brain tissue and to reliably quantify acetylation marks on histones H3 and H4.

摘要

在所有真核生物中,染色质作为所有遗传信息的生理模板,对于遗传至关重要。染色质会经历一系列多样的翻译后修饰(PTM),这些修饰大多发生在组蛋白的氨基末端(即组蛋白尾巴),并调节其下方DNA的可及性和功能状态。组蛋白尾巴从核小体核心伸出,在细胞生长和分化过程中会被组蛋白乙酰转移酶(HATs)添加乙酰基,并被组蛋白去乙酰化酶(HDACs)去除乙酰基。组蛋白尾巴上赖氨酸(K)残基的特定乙酰化模式通过(1)影响核心组蛋白组装和(2)将协同或拮抗的染色质相关蛋白招募到转录位点,来决定转录活性或转录抑制染色质之间的动态平衡。组蛋白尾巴PTM复杂性质的基本调控机制影响着大多数以染色质为模板的过程,并导致正常和病理发育中细胞成熟和分化的变化。本报告的目的是为新手提供一种从细胞和脑组织中纯化核心组蛋白的有效方法,并可靠地定量组蛋白H3和H4上的乙酰化标记。

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