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塞莫克·贝里人群线粒体DNA高变区的序列多态性和单倍群数据。

Sequence polymorphism and haplogroup data of the hypervariable regions on mtDNA in Semoq Beri population.

作者信息

Zahidin Muhamad Aidil, Omar Wan Bayani Wan, Taib Wan Rohani Wan, Japning Jeffrine Rovie Ryan, Abdullah Mohd Tajuddin

机构信息

Institute of Tropical Biodiversity and Sustainable Development, Universiti Malaysia Terengganu, 21030 Kuala Nerus, Malaysia.

School of Marine and Environmental Sciences, Universiti Malaysia Terengganu, 21030 Kuala Nerus, Malaysia.

出版信息

Data Brief. 2018 Nov 8;21:2609-2615. doi: 10.1016/j.dib.2018.10.158. eCollection 2018 Dec.


DOI:10.1016/j.dib.2018.10.158
PMID:30761343
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6288409/
Abstract

Orang Asli is the aboriginal people in Peninsular Malaysia who have been recognized as indigenous to the country and still practicing traditional lifestyle. The molecular interest on the Orang Asli started when the earliest prehistoric migration occurred approximately 200 kya and entering Peninsular Malaysia 50 kya in stages. A total of three groups of Orang Asli present in Peninsular Malaysia, namely, Negrito also known as Semang, Senoi and Proto Malays. Through records, there is no research has been conducted on mtDNA variations in the Semoq Beri population, one of the tribes in Senoi group. In this report, variations of mtDNA were analysed in the population in Hulu Terengganu as an initial effort to establish the genetic characterisation and elucidating the history of Orang Asli expansion in Peninsular Malaysia. An array of mtDNA parameters was estimated and the observed polymorphisms with their respective haplogroups in comparison to rCRS were inferred respectively. The DNA sequences are registered in the NCBI with accession numbers KY853670-KY853753.

摘要

奥朗阿斯利人是马来西亚半岛的原住民,他们被认为是该国的土著居民,至今仍保持着传统的生活方式。对奥朗阿斯利人的分子研究始于大约20万年前最早的史前迁徙,并分阶段于5万年前进入马来西亚半岛。马来西亚半岛共有三组奥朗阿斯利人,即尼格利陀人(也被称为塞芒人)、塞诺伊人和原马来人。通过记录可知,尚未对塞诺伊族群中的一个部落——塞莫克贝里人的线粒体DNA变异进行研究。在本报告中,对登嘉楼 Hulu地区的人群进行了线粒体DNA变异分析,作为建立遗传特征和阐明奥朗阿斯利人在马来西亚半岛扩张历史的初步努力。估计了一系列线粒体DNA参数,并分别推断了与rCRS相比观察到的多态性及其各自的单倍群。这些DNA序列已在NCBI注册,登录号为KY853670 - KY853753。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dae0/6288409/72e14ea21917/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dae0/6288409/e3ef659f4683/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dae0/6288409/72e14ea21917/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dae0/6288409/e3ef659f4683/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dae0/6288409/72e14ea21917/gr2.jpg

相似文献

[1]
Sequence polymorphism and haplogroup data of the hypervariable regions on mtDNA in Semoq Beri population.

Data Brief. 2018-11-8

[2]
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[3]
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[4]
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[5]
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[6]
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[7]
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[8]
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[9]
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[10]
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引用本文的文献

[1]
Partial mtDNA sequencing data of vulnerable from the Malaysian Borneo.

Data Brief. 2019-6-25

[2]
Compendium of hand, foot and mouth disease data in Malaysia from years 2010-2017.

Data Brief. 2019-3-20

本文引用的文献

[1]
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Mol Biol Evol. 2016-7

[2]
Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation.

Hum Mutat. 2009-2

[3]
Phylogeography and ethnogenesis of aboriginal Southeast Asians.

Mol Biol Evol. 2006-12

[4]
DnaSP, DNA polymorphism analyses by the coalescent and other methods.

Bioinformatics. 2003-12-12

[5]
Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA.

Nat Genet. 1999-10

[6]
Sequence and organization of the human mitochondrial genome.

Nature. 1981-4-9

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