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利用逆转录聚合酶链反应检测葡萄中的金黄植原体

Detection of Flavescence Dorée Phytoplasma in Grapevine by Reverse-Transcription PCR.

作者信息

Margaria P, Rosa C, Marzachì C, Turina M, Palmano S

机构信息

Istituto di Virologia Vegetale, CNR, 10135 Torino, Italy.

University of California, Department of Plant Pathology, Davis 95616.

出版信息

Plant Dis. 2007 Nov;91(11):1496-1501. doi: 10.1094/PDIS-91-11-1496.

Abstract

Flavescence dorée (FD) is the most serious phytoplasma disease of grapevine. This report describes a novel method of detecting FD phytoplasma based on reverse-transcription polymerase chain reaction (RT-PCR) on 16S ribosomal RNA (16SrRNA) which will greatly improve mass screening of infected grapevines. A rapid protocol for extracting sap from whole leaves or midveins and successive one-tube amplification by RT-PCR was applied to grapevine samples with or without symptoms collected from different areas of Piedmont (northwestern Italy). Results were compared with those obtained using one of the current diagnostic methods that utilizes nested PCR on phytoplasma DNA-enriched preparations. A Cohen's kappa index of 0.76 indicated a substantial agreement between the two sets of results. The RT-PCR method has the advantage of being a rapid, reliable, and sensitive assay for large-scale screening of grapevines.

摘要

葡萄黄化病(FD)是葡萄最严重的植原体病害。本报告描述了一种基于16S核糖体RNA(16SrRNA)的逆转录聚合酶链反应(RT-PCR)检测FD植原体的新方法,该方法将大大提高对受感染葡萄藤的大规模筛查。一种从整片叶子或中脉快速提取汁液并通过RT-PCR进行连续单管扩增的方案应用于从意大利西北部皮埃蒙特不同地区采集的有症状或无症状的葡萄样本。将结果与使用当前诊断方法之一(该方法对富含植原体DNA的制剂进行巢式PCR)获得的结果进行比较。科恩kappa指数为0.76表明两组结果之间有实质性一致性。RT-PCR方法具有快速、可靠和灵敏的优点,可用于葡萄的大规模筛查。

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