Suppr超能文献

由在……的5'非翻译区引入一种新型uATG引起的颅额鼻综合征

Craniofrontonasal Syndrome Caused by Introduction of a Novel uATG in the 5'UTR of .

作者信息

Romanelli Tavares Vanessa L, Kague Erika, Musso Camila M, Alegria Thiago G P, Freitas Renato S, Bertola Debora R, Twigg Stephen R F, Passos-Bueno Maria R

机构信息

Centro de Pesquisa sobre o Genoma Humano e Células-Tronco (CEGH-CEL), Curitiba, Brazil.

Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, Curitiba, Brazil.

出版信息

Mol Syndromol. 2019 Feb;10(1-2):40-47. doi: 10.1159/000490635. Epub 2018 Jul 3.

Abstract

Craniofrontonasal syndrome (CFNS) is an X-linked disorder caused by mutations in which females are more severely affected than males. Severe male phenotypes are associated with mosaicism, supporting cellular interference for sex bias in this disease. Although many variants have been found in the coding region of , only 2 pathogenic variants have been identified in the same nucleotide in 5'UTR, disrupting the stop codon of an upstream open reading frame (uORF). uORFs are known to be part of a wide range of post-transcriptional regulation processes, and just recently, their association with human diseases has come to light. In the present study, we analyzed in a female patient with typical features of CFNS. We identified a variant, located at c.-411, creating a new upstream ATG (uATG) in the 5'UTR of which is predicted to alter an existing uORF. Dual-luciferase reporter assays showed significant reduction in protein translation, but no difference in the mRNA levels. Our study demonstrates, for the first time, the regulatory impact of uATG formation on EFNB1 levels and suggests that this should be the target region in molecular diagnosis of CFNS cases without pathogenic variants in the coding and splice sites regions of .

摘要

颅额鼻综合征(CFNS)是一种X连锁疾病,由突变引起,女性比男性受影响更严重。严重的男性表型与嵌合体有关,支持这种疾病中性别偏差的细胞干扰。尽管在[基因名称]的编码区发现了许多变体,但在5'UTR的同一核苷酸中仅鉴定出2个致病变体,破坏了上游开放阅读框(uORF)的终止密码子。已知uORF是广泛的转录后调控过程的一部分,最近,它们与人类疾病的关联才被发现。在本研究中,我们分析了一名具有CFNS典型特征的女性患者的[基因名称]。我们鉴定出一个位于c.-411的变体,在[基因名称]的5'UTR中创建了一个新的上游ATG(uATG),预计会改变现有的uORF。双荧光素酶报告基因检测显示蛋白质翻译显著减少,但mRNA水平没有差异。我们的研究首次证明了uATG形成对EFNB1水平的调控影响,并表明这应该是在[基因名称]的编码和剪接位点区域没有致病变体的CFNS病例分子诊断中的目标区域。

相似文献

1
Craniofrontonasal Syndrome Caused by Introduction of a Novel uATG in the 5'UTR of .
Mol Syndromol. 2019 Feb;10(1-2):40-47. doi: 10.1159/000490635. Epub 2018 Jul 3.
4
Aberrant cell segregation in the craniofacial primordium and the emergence of facial dysmorphology in craniofrontonasal syndrome.
PLoS Genet. 2020 Feb 24;16(2):e1008300. doi: 10.1371/journal.pgen.1008300. eCollection 2020 Feb.
6
Severe craniofrontonasal syndrome in a male patient mosaic for a novel nonsense mutation in EFNB1.
Eur J Med Genet. 2020 Jun;63(6):103924. doi: 10.1016/j.ejmg.2020.103924. Epub 2020 Mar 30.
7
Identification and expression analysis of a novel intragenic EFNB1 mutation causing craniofrontonasal syndrome.
Meta Gene. 2013 Nov 28;2:25-31. doi: 10.1016/j.mgene.2013.11.001. eCollection 2014 Dec.

引用本文的文献

2
LMX1B haploinsufficiency due to variants in the 5'UTR as a cause of Nail-Patella syndrome.
NPJ Genom Med. 2025 Feb 12;10(1):10. doi: 10.1038/s41525-024-00460-6.
3
Craniofrontonasal syndrome in a patient with an inv(X)(p22.2q13.1), separating EFNB1 from its enhancer.
Eur J Hum Genet. 2025 Apr;33(4):546-551. doi: 10.1038/s41431-024-01761-1. Epub 2024 Dec 7.
4
Upstream open reading frames: new players in the landscape of cancer gene regulation.
NAR Cancer. 2024 May 20;6(2):zcae023. doi: 10.1093/narcan/zcae023. eCollection 2024 Jun.
5
Re-evaluating the impact of alternative RNA splicing on proteomic diversity.
Front Genet. 2023 Feb 9;14:1089053. doi: 10.3389/fgene.2023.1089053. eCollection 2023.
7
Annotation of uORFs in the OMIM genes allows to reveal pathogenic variants in 5'UTRs.
Nucleic Acids Res. 2023 Feb 22;51(3):1229-1244. doi: 10.1093/nar/gkac1247.
9
Alternative ORFs and small ORFs: shedding light on the dark proteome.
Nucleic Acids Res. 2020 Feb 20;48(3):1029-1042. doi: 10.1093/nar/gkz734.
10
Disruption of TWIST1 translation by 5' UTR variants in Saethre-Chotzen syndrome.
Hum Mutat. 2018 Oct;39(10):1360-1365. doi: 10.1002/humu.23598. Epub 2018 Aug 7.

本文引用的文献

1
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization.
Brief Bioinform. 2019 Jul 19;20(4):1160-1166. doi: 10.1093/bib/bbx108.
2
Exomic variants of an elderly cohort of Brazilians in the ABraOM database.
Hum Mutat. 2017 Jul;38(7):751-763. doi: 10.1002/humu.23220. Epub 2017 May 3.
3
EPHRIN-B1 Mosaicism Drives Cell Segregation in Craniofrontonasal Syndrome hiPSC-Derived Neuroepithelial Cells.
Stem Cell Reports. 2017 Mar 14;8(3):529-537. doi: 10.1016/j.stemcr.2017.01.017. Epub 2017 Feb 23.
4
Translation efficiency of mRNAs is increased by antisense oligonucleotides targeting upstream open reading frames.
Nat Biotechnol. 2016 Aug;34(8):875-80. doi: 10.1038/nbt.3589. Epub 2016 Jul 11.
5
7
Upstream ORFs are prevalent translational repressors in vertebrates.
EMBO J. 2016 Apr 1;35(7):706-23. doi: 10.15252/embj.201592759. Epub 2016 Feb 19.
9
AliView: a fast and lightweight alignment viewer and editor for large datasets.
Bioinformatics. 2014 Nov 15;30(22):3276-8. doi: 10.1093/bioinformatics/btu531. Epub 2014 Aug 5.
10
The regulatory potential of upstream open reading frames in eukaryotic gene expression.
Wiley Interdiscip Rev RNA. 2014 Nov-Dec;5(6):765-78. doi: 10.1002/wrna.1245. Epub 2014 Jul 3.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验