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使用pDualrep2高通量筛选平台鉴定N-取代三唑并氮杂环丁烷作为新型抗菌剂

Identification of N-Substituted Triazolo-azetidines as Novel Antibacterials using pDualrep2 HTS Platform.

作者信息

Ivanenkov Yan A, Yamidanov Renat S, Osterman Ilya A, Sergiev Petr V, Aladinskiy Vladimir A, Aladinskaya Anastasia V, Terentiev Victor A, Veselov Mark S, Ayginin Andrey A, Skvortsov Dmitry A, Komarova Katerina S, Chemeris Alexey V, Baimiev Alexey Kh, Sofronova Alina A, Malyshev Alexander S, Machulkin Alexey E, Petrov Rostislav A, Bezrukov Dmitry S, Filkov Gleb I, Puchinina Maria M, Zainullina Liana F, Maximova Marina A, Zileeva Zulfiya R, Vakhitova Yulia V, Dontsova Olga A

机构信息

Institute of Biochemistry and Genetics Russian Academy of Science (IBG RAS) Ufa Scientific Centre, Oktyabrya Prospekt 71, 450054, Ufa, Russian Federation.

Moscow Institute of Physics and Technology (State University), 9 Institutskiy lane, Dolgoprudny City, Moscow Region, 141700, Russian Federation.

出版信息

Comb Chem High Throughput Screen. 2019 Aug 8;22(5):346-354. doi: 10.2174/1386207322666190412165316.

Abstract

AIM AND OBJECTIVE

Antibiotic resistance is a serious constraint to the development of new effective antibacterials. Therefore, the discovery of the new antibacterials remains one of the main challenges in modern medicinal chemistry. This study was undertaken to identify novel molecules with antibacterial activity.

MATERIALS AND METHODS

Using our unique double-reporter system, in-house large-scale HTS campaign was conducted for the identification of antibacterial potency of small-molecule compounds. The construction allows us to visually assess the underlying mechanism of action. After the initial HTS and rescreen procedure, luciferase assay, C14-test, determination of MIC value and PrestoBlue test were carried out.

RESULTS

HTS rounds and rescreen campaign have revealed the antibacterial activity of a series of Nsubstituted triazolo-azetidines and their isosteric derivatives that has not been reported previously. Primary hit-molecule demonstrated a MIC value of 12.5 µg/mL against E. coli Δ tolC with signs of translation blockage and no SOS-response. Translation inhibition (26%, luciferase assay) was achieved at high concentrations up to 160 µg/mL, while no activity was found using C14-test. The compound did not demonstrate cytotoxicity in the PrestoBlue assay against a panel of eukaryotic cells. Within a series of direct structural analogues bearing the same or bioisosteric scaffold, compound 2 was found to have an improved antibacterial potency (MIC=6.25 µg/mL) close to Erythromycin (MIC=2.5-5 µg/mL) against the same strain. In contrast to the parent hit, this compound was more active and selective, and provided a robust IP position.

CONCLUSION

N-substituted triazolo-azetidine scaffold may be used as a versatile starting point for the development of novel active and selective antibacterial compounds.

摘要

目的

抗生素耐药性是新型有效抗菌药物研发的严重制约因素。因此,新型抗菌药物的发现仍是现代药物化学的主要挑战之一。本研究旨在鉴定具有抗菌活性的新型分子。

材料与方法

利用我们独特的双报告系统,开展了内部大规模高通量筛选活动,以鉴定小分子化合物的抗菌效力。该构建使我们能够直观地评估潜在的作用机制。在初始高通量筛选和复筛程序之后,进行了荧光素酶测定、C14测试、最低抑菌浓度值测定和普洛麦格公司的细胞活力检测试剂盒测试。

结果

高通量筛选轮次和复筛活动揭示了一系列N-取代三唑并氮杂环丁烷及其等排衍生物的抗菌活性,这在以前尚未见报道。主要命中分子对大肠杆菌ΔtolC的最低抑菌浓度值为12.5μg/mL,有翻译阻断迹象且无SOS反应。在高达160μg/mL的高浓度下实现了26%的翻译抑制(荧光素酶测定),而使用C14测试未发现活性。该化合物在针对一组真核细胞的普洛麦格公司的细胞活力检测试剂盒测试中未显示细胞毒性。在一系列具有相同或生物电子等排体支架的直接结构类似物中,发现化合物2对同一菌株具有更高的抗菌效力(最低抑菌浓度=6.25μg/mL),接近红霉素(最低抑菌浓度=2.5 - 5μg/mL)。与亲本命中物相比,该化合物活性更高且更具选择性,并提供了强大的知识产权地位。

结论

N-取代三唑并氮杂环丁烷支架可作为开发新型活性和选择性抗菌化合物的通用起始点。

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