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基于转录组数据的七叶树三萜皂苷合成研究

[Synthesis of triterpenoid saponins from Aesculus chinensis based on transcriptome data].

作者信息

Wei Yi-Ding, Xiong Chao, Zhang Tian-Yuan, Gao Han, Yin Qing-Gang, Yao Hui, Sun Wei, Hu Zhi-Gang, Chen Shi-Lin

机构信息

School of Pharmacy,Hubei University of Chinese Medicine Wuhan 430065,China Institute of Chinese Materia Medica,China Academy of Chinese Medical Sciences Beijing 100700,China.

Institute of Chinese Materia Medica,China Academy of Chinese Medical Sciences Beijing 100700,China.

出版信息

Zhongguo Zhong Yao Za Zhi. 2019 Mar;44(6):1135-1144. doi: 10.19540/j.cnki.cjcmm.20190118.012.

Abstract

Aesculus chinensis belongs to Hippocastanaceae family,bears medicinal and ornamental values. The oleanane type triterpenoid saponin aescin is regarded as active ingredient and accumulated in seed. In order to understand its molecular basis of the triterpenoid biosynthesis,we used high-throughput sequencing under Illumina Hi Seq 2000 platform to obtain the transcriptome data of seed and flower from A. chinensis to further mine the genes involved in its metabolic pathway. Unigene's de novo splicing was performed using Trinity software; the transcriptome results were annotated with KEGG database to predict the specific pathways of the aescin triterpenoid metabolism. Terpenoid and triterpenoid pathways were found from transcriptome data,and forty seven and twenty seven corresponding genes were uncovered respectively. It was found that there are eight kinds of enzymes related to the terpenoid metabolism pathway precursors and three kinds of enzymes related to the triterpenoid metabolism pathway. In this study,five genes corresponding to triterpene cyclase were analyzed in A. chinensis for the first time,which may participate in the synthesis of triterpenoid. It' s revealed that there were thirty three differential genes associated with the ko00900 and ko00909 pathways by analysis on the difference in transcriptome expression between seeds and flowers; seventeen unigenes were up-regulated and sixteen unigenes were down-regulated in the seeds relative to flowers. In this study, qRT-PCR experiments were used to verify the expression of three key enzyme genes of SQE( Unigene25806),HMGS( Unigene36710),and β-AS( Unigene33291). The results of qRT-PCR were consistent with the transcriptome data. The candidate genes related to triterpenoid saponin aescin synthesis in A. chinensis found in this study can provide theoretical basis for the metabolism synthesis and regulation of aescin.

摘要

七叶树属于七叶树科,具有药用和观赏价值。齐墩果烷型三萜皂苷七叶皂苷被视为活性成分并积累在种子中。为了了解其三萜生物合成的分子基础,我们在Illumina Hi Seq 2000平台下使用高通量测序获得了七叶树种子和花的转录组数据,以进一步挖掘参与其代谢途径的基因。使用Trinity软件进行单基因的从头拼接;转录组结果用KEGG数据库进行注释,以预测七叶皂苷三萜代谢的特定途径。从转录组数据中发现了萜类和三萜类途径,分别发现了47个和27个相应的基因。发现有8种与萜类代谢途径前体相关的酶和3种与三萜类代谢途径相关的酶。在本研究中,首次在七叶树中分析了与三萜环化酶对应的5个基因,它们可能参与三萜类的合成。通过分析种子和花之间转录组表达的差异,发现有33个差异基因与ko00900和ko00909途径相关;相对于花,种子中有17个单基因上调,16个单基因下调。在本研究中,使用qRT-PCR实验验证了SQE(Unigene25806)、HMGS(Unigene36710)和β-AS(Unigene33291)这三个关键酶基因的表达。qRT-PCR结果与转录组数据一致。本研究中发现的与七叶树三萜皂苷七叶皂苷合成相关的候选基因可为七叶皂苷的代谢合成和调控提供理论依据。

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