Colección Nacional de Insectos, Instituto de Biología, Universidad Autónoma de México, Ciudad de México, Delegación Coyoacán, CDMX, Mexico.
Department of Plant and Environmental Protection Sciences, University of Hawaii, Honolulu, HI.
J Econ Entomol. 2019 Aug 3;112(4):2001-2006. doi: 10.1093/jee/toz073.
For more than a decade, various research groups have tracked the population genetics of the oriental fruit fly, Bactrocera dorsalis (Hendel) in China and neighboring countries using mitochondrial cytochrome c oxidase subunit I (COI) DNA. Although most research has reported high levels of mtDNA variation, to date no efforts have been made to integrate and compare the results from these studies simultaneously. Here, we show that: 1) despite the fact that a large portion of the sampling effort has focused on the Yunnan province beginning in 2005, each subsequent study recovers only a small number of previously sampled haplotypes; 2) new haplotypes of B. dorsalis remain to be found, a projection of new haplotypes versus the number of individuals sampled suggest that sampling the species mtDNA diversity is far from reaching an asymptote; 3) it is unlikely that the observed genetic variation is the result of NUMTs (nuclear mitochondrial DNA), as most differences between haplotypes are silent substitutions; and 4) although all studies employed the 3' end of COI, the length of COI fragment sequenced differs among studies, making comparisons challenging. Therefore, we offer these results with the caveat that mtDNA diversity might be underestimated in China.
十多年来,许多研究小组使用线粒体细胞色素 c 氧化酶亚基 I(COI)DNA 在中国及邻国追踪东方果实蝇(Bactrocera dorsalis(Hendel))的群体遗传学。尽管大多数研究报告了高水平的 mtDNA 变异,但迄今为止,尚未有人努力同时整合和比较这些研究的结果。在这里,我们表明:1)尽管自 2005 年以来,大部分采样工作都集中在云南省,但随后的每一项研究仅回收了少量以前采样的单倍型;2)仍然有新的东方果实蝇单倍型有待发现,根据新单倍型与采样个体数量的预测,采样该物种 mtDNA 多样性远未达到渐近线;3)观察到的遗传变异不太可能是 NUMTs(核线粒体 DNA)的结果,因为大多数单倍型之间的差异是沉默的取代;4)尽管所有研究都采用了 COI 的 3'端,但 COI 片段测序的长度在不同研究中存在差异,这使得比较具有挑战性。因此,我们提供这些结果的警告是,中国的 mtDNA 多样性可能被低估了。