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卤虫 HSP70 家族基因的序列与表达分析。

Sequence and expression analysis of HSP70 family genes in Artemia franciscana.

机构信息

Laboratory of Aquaculture & Artemia Reference Center, Department of Animal Sciences and Aquatic Ecology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000, Ghent, Belgium.

Center of Excellence for Molecular Biology and Genomics of Shrimp, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand.

出版信息

Sci Rep. 2019 Jun 10;9(1):8391. doi: 10.1038/s41598-019-44884-y.

Abstract

Thus far, only one gene from the heat shock protein 70 (HSP70) family has been identified in Artemia franciscana. Here, we used the draft Artemia transcriptome database to search for other genes in the HSP70 family. Four novel HSP70 genes were identified and designated heat shock cognate 70 (HSC70), heat shock 70 kDa cognate 5 (HSC70-5), Immunoglobulin heavy-chain binding protein (BIP), and hypoxia up-regulated protein 1 (HYOU1). For each of these genes, we obtained nucleotide and deduced amino acid sequences, and reconstructed a phylogenetic tree. Expression analysis revealed that in the juvenile state, the transcription of HSP70 and HSC70 was significantly (P < 0.05) higher in a population of A. franciscana selectively bred for increased induced thermotolerance (TF12) relative to a control population (CF12). Following non-lethal heat shock treatment at the nauplius stage, transcription of HSP70, HSC70, and HSC70-5 were significantly (P < 0.05) up-regulated in TF12. In contrast, transcription of the other HSP70 family members in A. franciscana (BIP, HYOU1, and HSPA4) showed no significant (P > 0.05) induction. Gene expression analysis demonstrated that not all members of the HSP70 family are involved in the response to heat stress and selection and that especially altered expression of HSC70 plays a role in a population selected for increased thermotolerance.

摘要

到目前为止,仅在卤虫中鉴定出热休克蛋白 70(HSP70)家族的一个基因。在这里,我们使用卤虫转录组草案数据库来搜索 HSP70 家族中的其他基因。鉴定出了四个新的 HSP70 基因,并将其命名为热休克同源物 70(HSC70)、热休克 70 kDa 同源物 5(HSC70-5)、免疫球蛋白重链结合蛋白(BIP)和缺氧上调蛋白 1(HYOU1)。对于每个基因,我们获得了核苷酸和推导的氨基酸序列,并构建了系统发育树。表达分析表明,在幼体状态下,与对照种群(CF12)相比,选择培育提高诱导耐热性(TF12)的卤虫种群中 HSP70 和 HSC70 的转录显著(P < 0.05)更高。在无致死热休克处理后,TF12 中 HSP70、HSC70 和 HSC70-5 的转录显著(P < 0.05)上调。相比之下,卤虫 HSP70 家族其他成员(BIP、HYOU1 和 HSPA4)的转录没有明显变化(P > 0.05)。基因表达分析表明,并非 HSP70 家族的所有成员都参与对热应激的反应和选择,特别是 HSC70 的表达改变在选择提高耐热性的种群中起作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/42eb/6557860/017374d8dbb5/41598_2019_44884_Fig1_HTML.jpg

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