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采用多光谱和分子对接方法阐明牛血清白蛋白与萘基羟肟酸的结合及其抗氧化活性。

Explication of bovine serum albumin binding with naphthyl hydroxamic acids using a multispectroscopic and molecular docking approach along with its antioxidant activity.

机构信息

School of Studies in Chemistry, Pt. Ravishankar Shukla University, Raipur, Chhattisgarh, India.

Interdisciplinary Biotechnology Unit, Aligarh Muslim University, Aligarh, 202002, Uttar Pradesh, India.

出版信息

Luminescence. 2019 Sep;34(6):628-643. doi: 10.1002/bio.3645. Epub 2019 Jun 12.

Abstract

In the present investigation, the protein-binding properties of naphthyl-based hydroxamic acids (HAs), N-1-naphthyllaurohydroxamic acid (1) and N-1-naphthyl-p-methylbenzohydroxamic acid (2) were studied using bovine serum albumin (BSA) and UV-visible spectroscopy, fluorescence spectroscopy, diffuse reflectance spectroscopy-Fourier transform infrared (DRS-FTIR), circular dichroism (CD), and cyclic voltammetry along with computational approaches, i.e. molecular docking. Alteration in the antioxidant activities of compound 1 and compound 2 during interaction with BSA was also studied. From the fluorescence studies, thermodynamic parameters such as Gibb's free energy (ΔG), entropy change (ΔS) and enthalpy change (ΔH) were calculated at five different temperatures (viz., 298, 303, 308, 313 or 318 K) for the HAs-BSA interaction. The results suggested that the binding process was enthalpy driven with dominating hydrogen bonds and van der Waals' interactions for both compounds. Warfarin (WF) and ibuprofen (IB) were used for competitive site-specific marker binding interaction and revealed that compound 1 and compound 2 were located in subdomain IIA (Sudlow's site I) on the BSA molecule. Conclusions based on above-applied techniques signify that various non-covalent forces were involved during the HAs-BSA interaction. Therefore the resulted HAs-BSA interaction manifested its effect in transportation, distribution and metabolism for the drug in the blood circulation system, therefore establishing HAs as a drug-like molecule.

摘要

在本研究中,使用牛血清白蛋白(BSA)和紫外可见光谱、荧光光谱、漫反射傅里叶变换红外光谱(DRS-FTIR)、圆二色性(CD)和循环伏安法结合计算方法(即分子对接)研究了基于萘基的羟肟酸(HAs)、N-1-萘基劳羟肟酸(1)和 N-1-萘基-p-甲基苯并羟肟酸(2)的蛋白质结合特性。还研究了化合物 1 和化合物 2 在与 BSA 相互作用过程中抗氧化活性的变化。从荧光研究中,在五个不同温度(即 298、303、308、313 或 318 K)下计算了吉布斯自由能(ΔG)、熵变(ΔS)和焓变(ΔH)等热力学参数,用于 HAs-BSA 相互作用。结果表明,结合过程是焓驱动的,两种化合物都主要存在氢键和范德华相互作用。华法林(WF)和布洛芬(IB)用于竞争性的特定结合位点标记相互作用,表明化合物 1 和化合物 2 位于 BSA 分子的亚结构域 IIA(Sudlow 位点 I)上。基于上述应用技术的结论表明,在 HAs-BSA 相互作用过程中涉及多种非共价相互作用力。因此,所得的 HAs-BSA 相互作用表明其在药物在血液循环系统中的运输、分布和代谢中起作用,从而将 HAs 确定为一种类似药物的分子。

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